PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100190320031 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | MYB_related | ||||||||
Protein Properties | Length: 174aa MW: 19773.8 Da PI: 4.3374 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.3 | 1.8e-08 | 18 | 57 | 1 | 41 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqck 41 +g+W+ +Ed +l d+++ +G g+W+ ar + +kq+k Ote100190320031|100190320031 18 KGAWSSQEDSILTDYITAHGEGRWSILARDSV-LKQAKQLK 57 79****************************99.89999988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50090 | 6.992 | 13 | 64 | IPR017877 | Myb-like domain |
Gene3D | G3DSA:1.10.10.60 | 2.3E-9 | 13 | 57 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 4.29E-6 | 15 | 60 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 0.00156 | 20 | 57 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence Send to blast |
MNDEISSIER SGGEEIRKGA WSSQEDSILT DYITAHGEGR WSILARDSVL KQAKQLKYDI 60 NSMEFKELVR DVWVPRLSEQ VQLEASRCNN LDNGSEELQM INQRIDCLGD HASKLVGVPH 120 DLAMNLSEPE FGQNLHHSPY VGDGFKGDDG FANEFSYSEL WDAKLNDNYF WSCP |