PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100190040111

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

bHLH

Protein Properties

Length: 316aa MW: 35601.2 Da PI: 8.1263

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100190040111	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.3	0.00015	262	298	13	54
HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R+r+++ Lr ++P a ls +++L +Av+Y+ksL Ote100190040111\|100190040111 262 RKRVRKMVKALRGIVPGA-----NHLSTVAVLDEAVRYLKSL 298 7888889999*****8.....58*************99 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	10.41	249	298	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	1.7E-7	254	305	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	3.30E-4	260	303	No hit	No description
Gene3D	G3DSA:4.10.280.10	5.9E-5	260	305	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence Send to blast
MRIVVTRKKH QTVKQLGHIN MSVGSIAFYQ LMQVRQAEYF RQLLKPVTST LNLLSRTFFL 60 QTCSENSTES SSPEAARICV STKLFPKLAF MYSNNPNFPG KPMHLLGNQA QYHTQNSHMA 120 SLFDGLIPFS NVDIQPSEAC PRNFVIFDQT NNRSRIMFHP EISSKMFYPG VGGETPIFQE 180 KVDQKDANNE KEASSQLKED SADIDALLST DYEDEESDEE VSTACTNAIY ECSSSDSCSS 240 YESVSRKDES PFRRSHGDYK KRKRVRKMVK ALRGIVPGAN HLSTVAVLDE AVRYLKSLRV 300 EVKKLGVGKL NDQGSE

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011085262.1	3e-89	transcription factor bHLH144
Refseq	XP_011085263.1	3e-89	transcription factor bHLH144
Refseq	XP_011085264.1	3e-89	transcription factor bHLH144
TrEMBL	A0A4D9AN07	1e-116	A0A4D9AN07_SALSN; Uncharacterized protein
STRING	Migut.H01376.1.p	1e-79	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA8124	19	24