PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100187700041
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 230aa    MW: 26115.9 Da    PI: 6.1345
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100187700041genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.81.3e-101561961055
                                   HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                   r+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  Ote100187700041|100187700041 156 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVHYVKFLQ 196
                                   9******************97.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.96E-14143211IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.951146195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.2E-13146210IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.1E-11152201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.70E-12155200No hitNo description
PfamPF000106.7E-8156196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MEGFEAFLEG EWESLSKLFS CEDSELVLHS NGGADFFESS FDFCYANGND ASLFNSCFYS  60
VSQESSHSST FDHSXXXXXX XXXXXXXXXX XXXXXXXXXX XXXSSRTPRS KKAKKAGRET  120
TIDSNIVQSS SSEEESTAKA KGRKSRATDP QSLYARKRRE RINERLRILQ NLVPNGTKVD  180
ISTMLEEAVH YVKFLQLQIK LLSSDDKWMY APIAYNGMDI GLYQKIVPNV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A4D8ZS692e-56A0A4D8ZS69_SALSN; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA63922101