PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100185870201

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

EIL

Protein Properties

Length: 508aa MW: 56629.7 Da PI: 4.8661

Description

EIL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100185870201	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	EIN3	184.3	1.2e-56	39	166	1	125
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekg 81 eel+krmwkd+++lkr+ker+k + ++ a++++k + ++eqarrkkm+raQDgiLkYMlk mevc+a+GfvYgiipekg Ote100185870201\|100185870201 39 EELEKRMWKDRVRLKRIKERQKLAI--QQ-AAEKHKAKSPTEQARRKKMARAQDGILKYMLKLMEVCKARGFVYGIIPEKG 116 8******************9877..44.4899999**************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXXXXXXXX CS EIN3 82 kpvegasdsLraWWkekvefdrngpaaisky......qaknlilsgessl 125 kpv+gasd++r+WWkekv+fd+ngpaai+ky + l+ls+e+ l Ote100185870201\|100185870201 117 KPVSGASDNIREWWKEKVKFDKNGPAAIAKYeadfvsRGDGLVLSREEAL 166 *****************************5555444455666666665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04873	2.2E-55	39	152	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 508 aa Download sequence Send to blast
MAVMEDIGVD ISSDIEVDEI RGHDNIEEKD VSDEEIEAEE LEKRMWKDRV RLKRIKERQK 60 LAIQQAAEKH KAKSPTEQAR RKKMARAQDG ILKYMLKLME VCKARGFVYG IIPEKGKPVS 120 GASDNIREWW KEKVKFDKNG PAAIAKYEAD FVSRGDGLVL SREEALIHQP SSDNGSSSIS 180 EAPSKGRGNK RKPSIESDSD YDVDGVDNGL GSVSSRDDRN QPVDVENQAP AAAKQEKNKK 240 HATGRPRKRK LPKSSSNNQK AVPCLNEHPH EVNEENVNND NAQSNVFLTV ESQPELDGLT 300 AIMPQENDGE RQPSAVEPNF NYVCPLPSNA APIRGVNPDN EQLPHMMDQC VDLMAHGSHV 360 IHAPQDTQLH NTPQILRVWQ PEAQDSTLLQ GSHTRGGLTY DQQYYNPTTA AGSSHQGLHS 420 EAPFIQMQYK PDDPRFNLPV LPRNEDDIVD AHFPSALSSL SPDLPGYNPF SLQFDGTSAL 480 DTGDFEFGIE DDTVDDNNFA ELMKYFAS

Sequence ? help Back to Top

Protein Sequence Length: 508 aa Download sequence Send to blast

MAVMEDIGVD ISSDIEVDEI RGHDNIEEKD VSDEEIEAEE LEKRMWKDRV RLKRIKERQK  60
LAIQQAAEKH KAKSPTEQAR RKKMARAQDG ILKYMLKLME VCKARGFVYG IIPEKGKPVS  120
GASDNIREWW KEKVKFDKNG PAAIAKYEAD FVSRGDGLVL SREEALIHQP SSDNGSSSIS  180
EAPSKGRGNK RKPSIESDSD YDVDGVDNGL GSVSSRDDRN QPVDVENQAP AAAKQEKNKK  240
HATGRPRKRK LPKSSSNNQK AVPCLNEHPH EVNEENVNND NAQSNVFLTV ESQPELDGLT  300
AIMPQENDGE RQPSAVEPNF NYVCPLPSNA APIRGVNPDN EQLPHMMDQC VDLMAHGSHV  360
IHAPQDTQLH NTPQILRVWQ PEAQDSTLLQ GSHTRGGLTY DQQYYNPTTA AGSSHQGLHS  420
EAPFIQMQYK PDDPRFNLPV LPRNEDDIVD AHFPSALSSL SPDLPGYNPF SLQFDGTSAL  480
DTGDFEFGIE DDTVDDNNFA ELMKYFAS

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269\|PubMed:9215635, ECO:0000269\|PubMed:9851977}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011090401.1	1e-115	ETHYLENE INSENSITIVE 3-like 3 protein
Swissprot	O23116	4e-61	EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBL	A0A4D9ABF5	1e-122	A0A4D9ABF5_SALSN; Ethylene-insensitive protein 3
STRING	Migut.N02294.1.p	1e-106	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA304	23	178

Publications ? help Back to Top
Frerigmann H,Gigolashvili T Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency. Front Plant Sci, 2014. 5: p. 626 [PMID:25426131] Zheng ZL,Zhang B,Leustek T Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing. Front Plant Sci, 2014. 5: p. 710 [PMID:25566284] Panda SK,Sunkar R Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling. Plant Signal Behav, 2015. 10(4): p. e1010916 [PMID:25912823] Wawrzyńska A,Sirko A EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor. Plant Sci., 2016. 253: p. 50-57 [PMID:27968996]