PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100185160171

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

Nin-like

Protein Properties

Length: 983aa MW: 109399 Da PI: 5.7131

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100185160171	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.5	3.1e-29	596	647	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+++kdAAk++gvc+T+LKriCRqyGI+RWP+Rki+++ Ote100185160171\|100185160171 596 AEKHVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQYGISRWPSRKINKV 647 5899**********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.063	586	667	IPR003035	RWP-RK domain
Pfam	PF02042	1.6E-25	600	647	IPR003035	RWP-RK domain
SuperFamily	SSF54277	1.14E-20	875	967	No hit	No description
Gene3D	G3DSA:3.10.20.240	5.3E-22	880	962	No hit	No description
PROSITE profile	PS51745	18.798	883	965	IPR000270	PB1 domain
SMART	SM00666	1.9E-21	883	965	IPR000270	PB1 domain
Pfam	PF00564	1.0E-16	885	964	IPR000270	PB1 domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 983 aa Download sequence Send to blast
MEHSIFNTER GHGFPFLQRG GMEGMVGSTD ISVHGSSLEN STIDVADVMN FDMHSGWCNN 60 SNNSVEQMFH SYANFSPLEV FSFTQELNSG ICILDNDDNR CALMSEDKVM LHNMDYQLPF 120 SISSDDDGFS LAKMRDESSE HNVIDDVGNN VISRPPNPSL AEKMLRALNL FKEWSERGIL 180 AQVWVPMKNG DQYILSTSEQ PYLLDQTLTG YREVSRSFTF AAELKPCSFS GLPGRVYSSR 240 VPEWTSNVIY YNKAEYLRVQ YAVDHEVRGS VAIPVFEGDS SEGSCCAVLE LVTTKEKSNF 300 DLEIKNVCRA LQAVDLRSFA PPRLYPQSLS NNQRAALAEI TDVLRAVCYA HRLPLALTWI 360 PCSYIVGSGG RNMKIHARGN SRSTNEKIIL CIEDSACYVN DKDMKGFVHA CREHYLEEGQ 420 GIVGKALQSN HPFFYPDIKD YHISEYPLVH HARKFGLSAA VAIRLRSTYT GDNDYILEFF 480 LPVNMKGSTE QQLLLNNLSG TMQRICKSLR TVSDVELHEM DDPMVKSQDL ESRNIPPISV 540 PRRASEQSLV SGSLNTTDPT TQNIIECTTA RIEVGDTNER NAIGLRKQME KKRSTAEKHV 600 SLSVLQQYFS GSLKDAAKSI GVCPTTLKRI CRQYGISRWP SRKINKVNRS LRKIQSVLDS 660 VQGVEGGLKF DPTIGGLVPT HPIIHECDSK RRGVNPDNND SRDFVNQNAN SAPTSCMDNQ 720 TSIVKVEEGC LLDGTQMAGK CEPCPPHLLS SEHSRFAALD VAVSRPTSMN TVPWTTSPNV 780 APSSFLPKET FNRWVSINTS YISQNSSMLG VGDEMDTKSG DDIVMDRDDR VVEHNQPTSS 840 GMTDSSDRSG SGSMMNGSSS SSRSSGKKQN HKNDTSYADS GSKIVVKATY KEDTVRFKFD 900 TAFGCIQLYE EIAQRFKLQV GQFQLRYLDD EEEWVMLVSD SDLQECLEIL DFTGTRSMKF 960 LVREVASIVG SSGGSNCFLG EGS

Sequence ? help Back to Top

Protein Sequence Length: 983 aa Download sequence Send to blast

MEHSIFNTER GHGFPFLQRG GMEGMVGSTD ISVHGSSLEN STIDVADVMN FDMHSGWCNN  60
SNNSVEQMFH SYANFSPLEV FSFTQELNSG ICILDNDDNR CALMSEDKVM LHNMDYQLPF  120
SISSDDDGFS LAKMRDESSE HNVIDDVGNN VISRPPNPSL AEKMLRALNL FKEWSERGIL  180
AQVWVPMKNG DQYILSTSEQ PYLLDQTLTG YREVSRSFTF AAELKPCSFS GLPGRVYSSR  240
VPEWTSNVIY YNKAEYLRVQ YAVDHEVRGS VAIPVFEGDS SEGSCCAVLE LVTTKEKSNF  300
DLEIKNVCRA LQAVDLRSFA PPRLYPQSLS NNQRAALAEI TDVLRAVCYA HRLPLALTWI  360
PCSYIVGSGG RNMKIHARGN SRSTNEKIIL CIEDSACYVN DKDMKGFVHA CREHYLEEGQ  420
GIVGKALQSN HPFFYPDIKD YHISEYPLVH HARKFGLSAA VAIRLRSTYT GDNDYILEFF  480
LPVNMKGSTE QQLLLNNLSG TMQRICKSLR TVSDVELHEM DDPMVKSQDL ESRNIPPISV  540
PRRASEQSLV SGSLNTTDPT TQNIIECTTA RIEVGDTNER NAIGLRKQME KKRSTAEKHV  600
SLSVLQQYFS GSLKDAAKSI GVCPTTLKRI CRQYGISRWP SRKINKVNRS LRKIQSVLDS  660
VQGVEGGLKF DPTIGGLVPT HPIIHECDSK RRGVNPDNND SRDFVNQNAN SAPTSCMDNQ  720
TSIVKVEEGC LLDGTQMAGK CEPCPPHLLS SEHSRFAALD VAVSRPTSMN TVPWTTSPNV  780
APSSFLPKET FNRWVSINTS YISQNSSMLG VGDEMDTKSG DDIVMDRDDR VVEHNQPTSS  840
GMTDSSDRSG SGSMMNGSSS SSRSSGKKQN HKNDTSYADS GSKIVVKATY KEDTVRFKFD  900
TAFGCIQLYE EIAQRFKLQV GQFQLRYLDD EEEWVMLVSD SDLQECLEIL DFTGTRSMKF  960
LVREVASIVG SSGGSNCFLG EGS

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011073897.1	0.0	protein NLP9
TrEMBL	A0A4D9C4G6	0.0	A0A4D9C4G6_SALSN; Uncharacterized protein
STRING	Migut.N03106.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3981	24	45