PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100184580021 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 385aa MW: 40955.8 Da PI: 6.7089 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 21.3 | 5e-07 | 216 | 242 | 5 | 31 |
HHHHHHHHHHHHHHHHHHHHCTSCCC. CS HLH 5 hnerErrRRdriNsafeeLrellPkas 31 h+++Er RR+ri +++ L+el+P+a Ote100184580021|100184580021 216 HSIAERLRRERIAERMKSLQELVPNAN 242 99***********************73 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 4.58E-7 | 209 | 246 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.08E-4 | 209 | 250 | No hit | No description |
PROSITE profile | PS50888 | 10.81 | 211 | 266 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.4E-4 | 216 | 242 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.9E-6 | 216 | 243 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 385 aa Download sequence Send to blast |
MQPVSREFGT MNNINALLNQ HQISSLHEIH SHGQLQQMMA SLDFDPTAPP QDDFLEQMLS 60 SVPQSAASFP WADHYHSPPQ LEEQSAAVLA SKLRQHQISN GAAKALMLQQ QLMPQGDRDD 120 VDDGNGFKSA NSIQANDSSV EALLNGFAGS LGQTSNQPQH FHHPQVQNFG AAATATPSAA 180 AKAINQPAVS GSSGGGAAGQ PRQRVRARRG QATDPHSIAE RLRRERIAER MKSLQELVPN 240 ANKVLSMSRL GGASAVAPSV ADLSSEGRSS NGAPTASTSN NSDRMTVTEH QVAKLMEEDM 300 GSAMQYLQGK GLCLMPISLX XXXXXXXXXX XXXXXXXXDI KINGNPFLNA PASPSMSVLT 360 VQSAAVGGNV NGESSHKEAA SVSKS |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By cold, UV, ethylene (ACC), flagellin, jasmonic acid (JA), and salicylic acid (SA) treatments. {ECO:0000269|PubMed:12679534}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020551186.1 | 1e-136 | LOW QUALITY PROTEIN: transcription factor bHLH69-like | ||||
Swissprot | Q9ZUG9 | 2e-50 | BH066_ARATH; Transcription factor bHLH66 | ||||
TrEMBL | A0A0H3Y7K9 | 1e-172 | A0A0H3Y7K9_SALMI; Basic helix-loop-helix transcription factor | ||||
STRING | Migut.J01333.1.p | 1e-121 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3759 | 24 | 45 |
Publications ? help Back to Top | |||
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