PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100183810011 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | NAC | ||||||||
Protein Properties | Length: 220aa MW: 25393.3 Da PI: 6.2788 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 144 | 8.6e-45 | 4 | 135 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknra 77 l pGfrF Pt+eelv++yL +k++g++ ++++vi+ vdiy+++PwdLp+ + e+++w+fFs+r++++a+g r+nr Ote100183810011|100183810011 4 LLPGFRFYPTEEELVSFYLFHKLRGTRSDIDRVIPVVDIYDYNPWDLPQlggeVCGVESEQWFFFSPRQEREARGGRPNRL 84 579***************************99****************656754445788********************* PP NAM 78 tksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 t++gyWkatg+ +v+s++++++g k+t+vfy grap+g kt W m+ey++ Ote100183810011|100183810011 85 TTEGYWKATGSPGDVYSSQNSVIGRKRTMVFYVGRAPNGAKTIWKMNEYKA 135 *************************************************85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.22E-49 | 3 | 158 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 49.124 | 4 | 158 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.9E-21 | 6 | 134 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence Send to blast |
MDDLLPGFRF YPTEEELVSF YLFHKLRGTR SDIDRVIPVV DIYDYNPWDL PQLGGEVCGV 60 ESEQWFFFSP RQEREARGGR PNRLTTEGYW KATGSPGDVY SSQNSVIGRK RTMVFYVGRA 120 PNGAKTIWKM NEYKAALQSL SPNPQLSEEL SLCRIYKKSR SLRAFDRRPA SSQPQQQEYV 180 PAETTTQIPT NVVNTFQSLQ TENDQSCGWD YDHLINSFHN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 4e-36 | 4 | 161 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 4e-36 | 4 | 161 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 4e-36 | 4 | 161 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 4e-36 | 4 | 161 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
4dul_A | 4e-36 | 4 | 161 | 17 | 168 | NAC domain-containing protein 19 |
4dul_B | 4e-36 | 4 | 161 | 17 | 168 | NAC domain-containing protein 19 |
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Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020553649.1 | 5e-88 | NAC domain-containing protein 90-like isoform X2 | ||||
Refseq | XP_022842757.1 | 6e-88 | NAC domain-containing protein 90-like | ||||
Swissprot | Q9FMR3 | 2e-67 | NAC90_ARATH; NAC domain-containing protein 90 | ||||
TrEMBL | A0A2G9GF45 | 9e-88 | A0A2G9GF45_9LAMI; Uncharacterized protein | ||||
STRING | XP_010271606.1 | 4e-84 | (Nelumbo nucifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2494 | 23 | 57 |
Publications ? help Back to Top | |||
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