PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100183750261 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | NAC | ||||||||
Protein Properties | Length: 226aa MW: 25066 Da PI: 9.3778 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 28.9 | 3.3e-09 | 10 | 33 | 1 | 24 |
NAM 1 lppGfrFhPtdeelvveyLkkkve 24 lppGfrFhPtdeel+v+yL+++++ Ote100183750261|100183750261 10 LPPGFRFHPTDEELMVHYLRNQAT 33 79******************9865 PP | |||||||
2 | NAM | 66.1 | 1e-20 | 33 | 84 | 76 | 128 |
NAM 76 ratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 a+ sgyWkatg+dk+++s ++ vg+kk Lvfykgr pkg ktdW+mheyrl Ote100183750261|100183750261 33 TAAVSGYWKATGTDKAIYS-ASKYVGVKKALVFYKGRPPKGLKTDWIMHEYRL 84 35679**************.9999***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 29.535 | 1 | 111 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 3.92E-36 | 6 | 111 | IPR003441 | NAC domain |
Pfam | PF02365 | 9.5E-16 | 11 | 84 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence Send to blast |
MVGSRISSGL PPGFRFHPTD EELMVHYLRN QATAAVSGYW KATGTDKAIY SASKYVGVKK 60 ALVFYKGRPP KGLKTDWIMH EYRLTESLSQ TYKKTGSMRL DDWVLCRIYK KKNSGRSNLD 120 LSKVEESYGQ IAAAADDCNR NNNGSGQQQD AASYGFPRTY SLAHLWELDC VGSISQLLND 180 TSSYNGEEGS NGGFSKLLFG QAQQSANSTK THVHQTTFVN PVHGFQ |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 1e-34 | 10 | 116 | 17 | 170 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-34 | 10 | 116 | 17 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-34 | 10 | 116 | 17 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-34 | 10 | 116 | 17 | 170 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-34 | 10 | 116 | 20 | 173 | NAC domain-containing protein 19 |
3swm_B | 1e-34 | 10 | 116 | 20 | 173 | NAC domain-containing protein 19 |
3swm_C | 1e-34 | 10 | 116 | 20 | 173 | NAC domain-containing protein 19 |
3swm_D | 1e-34 | 10 | 116 | 20 | 173 | NAC domain-containing protein 19 |
3swp_A | 1e-34 | 10 | 116 | 20 | 173 | NAC domain-containing protein 19 |
3swp_B | 1e-34 | 10 | 116 | 20 | 173 | NAC domain-containing protein 19 |
3swp_C | 1e-34 | 10 | 116 | 20 | 173 | NAC domain-containing protein 19 |
3swp_D | 1e-34 | 10 | 116 | 20 | 173 | NAC domain-containing protein 19 |
4dul_A | 1e-34 | 10 | 116 | 17 | 170 | NAC domain-containing protein 19 |
4dul_B | 1e-34 | 10 | 116 | 17 | 170 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that binds DNA motifs 5'-CGT[AG](5N)NACG[ACT][AC][AT][ACG][ACT]-3' and 5'-CACG[ACT][AC][AT][AGT][CT]-3' in target genes promoters. Promotes leaf senescence and reduces fruit yield and sugar content, probably by establishing abscisic acid (ABA) homeostasis. {ECO:0000269|PubMed:29760199}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Accumulates during age-dependent and dark-induced leaf senescence. {ECO:0000269|PubMed:29760199}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011075519.1 | 5e-74 | LOW QUALITY PROTEIN: NAC transcription factor 29 | ||||
Swissprot | K4BWV2 | 8e-71 | NAP1_SOLLC; NAC domain-containing protein 1 | ||||
TrEMBL | G8E9N6 | 6e-95 | G8E9N6_SALMI; NAC domain protein NAC2 | ||||
STRING | PGSC0003DMT400007341 | 4e-71 | (Solanum tuberosum) | ||||
STRING | Migut.E00078.1.p | 3e-71 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA746 | 24 | 103 |
Publications ? help Back to Top | |||
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