PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100183600051
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family MYB_related
Protein Properties Length: 384aa    MW: 42104.4 Da    PI: 6.3898
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100183600051genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.85.9e-143775747
                                  HHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
               Myb_DNA-binding  7 eEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                                  eEd ++++a++ +G++ W++Ia+ +  gRt++ +k++w++ 
  Ote100183600051|100183600051 37 EEDHIILEAHAVYGNK-WASIAKLLH-GRTDNAIKNHWNST 75
                                  9***************.*********.***********986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007175.8E-73378IPR001005SANT/Myb domain
CDDcd001674.53E-93776No hitNo description
Gene3DG3DSA:1.10.10.601.7E-173777IPR009057Homeodomain-like
SuperFamilySSF466891.09E-123780IPR009057Homeodomain-like
PfamPF002492.6E-123775IPR001005SANT/Myb domain
PROSITE profilePS5129417.253780IPR017930Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    Send to blast
MNGISLSEIG QENGMLCVVM ELFFYGPEDF VSNEGYEEDH IILEAHAVYG NKWASIAKLL  60
HGRTDNAIKN HWNSTLRRKC VNRTRSTSAA GHMLSDTCTD WAKASKGGTS TGPPLNSFKL  120
LEKEKMMMMM SYQLKSSTDT IQTTAKCQTL EPNQHIVASA GSVKPLKSSE TEDLRMMVEG  180
QPKKYDCNTF TSASSNLLKP SSGSAEAHHH SVKGTVSRPV AKVGAFNVYN PYSHNKTISG  240
TFPLRGSLNS EPCKFLDGEH TIPPQCGHGC CTAFTEDASH LSLLGPEFVE YEELPPLSSP  300
EFMSVWTDVN SIAWIRSGLE NAGKASGGDD SLMLHARNSV LRNVEQNMRN DEFGNLFTGM  360
TREVGSTQMT MPAFNLRAEV EGLS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A1e-16277955107B-MYB
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076754.13e-95transcription factor MYB25
TrEMBLA0A059PSL51e-122A0A059PSL5_SALMI; MYB-related transcription factor