PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100183190061
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family EIL
Protein Properties Length: 419aa    MW: 47704.1 Da    PI: 5.0028
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100183190061genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3113.34.3e-3550128184
                                   XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                          EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekg 81 
                                   +el+krmw+d+m lkrlke++k     ke  +++ k+++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekg
  Ote100183190061|100183190061  50 DELEKRMWRDKMWLKRLKEMNKP----KEC-ADSLKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKG 125
                                   79******************998....666.88999********************************************* PP

                                   XXX CS
                          EIN3  82 kpv 84 
                                   kp+
  Ote100183190061|100183190061 126 KPE 128
                                   *95 PP
2EIN3127.91.7e-39125312176353
                                   S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT- CS
                          EIN3 176 GkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeeke 256
                                   Gk +ww+       qg+ppykkphdlkkawkv+vLtavik +sp+i++ir+l+rqsk+lqdkm+akes+++l+++nqee+ 
  Ote100183190061|100183190061 125 GKPEWWH----ELGQGPPPYKKPHDLKKAWKVGVLTAVIKNISPDIARIRKLVRQSKCLQDKMTAKESATWLAIINQEEAV 201
                                   7889999....55699***************************************************************** PP

                                   S--XXXX..XX......XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX......XXXXXXXXXXXXXXXXXXXXX CS
                          EIN3 257 catvsah..ss......slrkqspkvtlsceqkedvegkkeskikhvqavktta......gfpvvrkrkkkpsesakvssk 323
                                   +++++++  ++      s + +         +++dveg + ++  +v+++k +        +   +++ +  ++++ ++  
  Ote100183190061|100183190061 202 ARQLYPNrcPPlsssggSGSLGXXXXXXXXXSEYDVEGAEGESSFNVEEQKPNPlsllnvRVGGFQQQSHDIKDETVINLD 282
                                   *******8733544554333477788889999*****88888879999999977999977333334444455566666655 PP

                                   ......XXXXXXX.XXXXXXXXXXXXXXXX CS
                          EIN3 324 evsrtcqssqfrgsetelifadknsisqne 353
                                      +    +++ + e  ++f+d+ s+++++
  Ote100183190061|100183190061 283 FSRKRKLGNAMMDDELGFGFHDRISRDDHQ 312
                                   544555566666778888888888888876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.7E-3050127No hitNo description
Gene3DG3DSA:1.10.3180.101.9E-3987209IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.02E-3394202IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
PfamPF048732.3E-28128199No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    Send to blast
MMMFDDMMFC GDIDFFPSLT IKGGDICPQP PVEAEAVVED DYTDEEIDVD ELEKRMWRDK  60
MWLKRLKEMN KPKECADSLK QRQSQEQARR KKMSRAQDGI LKYMLKMMEV CKAQGFVYGI  120
IPEKGKPEWW HELGQGPPPY KKPHDLKKAW KVGVLTAVIK NISPDIARIR KLVRQSKCLQ  180
DKMTAKESAT WLAIINQEEA VARQLYPNRC PPLSSSGGSG SLGXXXXXXX XXSEYDVEGA  240
EGESSFNVEE QKPNPLSLLN VRVGGFQQQS HDIKDETVIN LDFSRKRKLG NAMMDDELGF  300
GFHDRISRDD HQRSCPLKQC LNLNMNEKME LSGVGVPEEG QRMIDELMSM YESNVGGNKA  360
LQCGNSDSLF EDNSLASVFD CNGGENLQRM MDISCNDLSQ GFSRFERGNL PKQDVPIWY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A2e-4112520746132Protein ETHYLENE INSENSITIVE 3
4zds_B2e-4112520746132Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor acting as a positive regulator in the ethylene response pathway. Could bind the primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020552292.11e-107LOW QUALITY PROTEIN: protein ETHYLENE INSENSITIVE 3
SwissprotQ9SLH09e-73EIL1_ARATH; ETHYLENE INSENSITIVE 3-like 1 protein
TrEMBLA0A2G9H5Y61e-102A0A2G9H5Y6_9LAMI; Uncharacterized protein
STRINGXP_009607827.13e-92(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30423178
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Kim HG, et al.
    GDSL LIPASE1 modulates plant immunity through feedback regulation of ethylene signaling.
    Plant Physiol., 2013. 163(4): p. 1776-91
    [PMID:24170202]
  3. Zhang GB,Yi HY,Gong JM
    The Arabidopsis ethylene/jasmonic acid-NRT signaling module coordinates nitrate reallocation and the trade-off between growth and environmental adaptation.
    Plant Cell, 2014. 26(10): p. 3984-98
    [PMID:25326291]
  4. Wang J, et al.
    Arabidopsis ROOT HAIR DEFECTIVE3 is involved in nitrogen starvation-induced anthocyanin accumulation.
    J Integr Plant Biol, 2015. 57(8): p. 708-21
    [PMID:25494721]
  5. Qing D, et al.
    Quantitative and Functional Phosphoproteomic Analysis Reveals that Ethylene Regulates Water Transport via the C-Terminal Phosphorylation of Aquaporin PIP2;1 in Arabidopsis.
    Mol Plant, 2016. 9(1): p. 158-174
    [PMID:26476206]
  6. Poulios S,Vlachonasios KE
    Synergistic action of histone acetyltransferase GCN5 and receptor CLAVATA1 negatively affects ethylene responses in Arabidopsis thaliana.
    J. Exp. Bot., 2016. 67(3): p. 905-18
    [PMID:26596766]
  7. Shen X,Li Y,Pan Y,Zhong S
    Activation of HLS1 by Mechanical Stress via Ethylene-Stabilized EIN3 Is Crucial for Seedling Soil Emergence.
    Front Plant Sci, 2016. 7: p. 1571
    [PMID:27822221]
  8. Abozeid A, et al.
    Ethylene Improves Root System Development under Cadmium Stress by Modulating Superoxide Anion Concentration in Arabidopsis thaliana.
    Front Plant Sci, 2017. 8: p. 253
    [PMID:28286514]
  9. Feng Y, et al.
    Ethylene promotes root hair growth through coordinated EIN3/EIL1 and RHD6/RSL1 activity in Arabidopsis.
    Proc. Natl. Acad. Sci. U.S.A., 2017. 114(52): p. 13834-13839
    [PMID:29233944]
  10. Harkey AF, et al.
    Identification of Transcriptional and Receptor Networks That Control Root Responses to Ethylene.
    Plant Physiol., 2018. 176(3): p. 2095-2118
    [PMID:29259106]