PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100180270061
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family MYB_related
Protein Properties Length: 267aa    MW: 29963.9 Da    PI: 7.3456
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100180270061genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.91.5e-15750146
                                  TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
               Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                                  rg+++ +E++ +++++++lG++ W++Ia+++  +Rt++++k++w++
  Ote100180270061|100180270061  7 RGKFSLQEEQTIIQLHALLGNR-WSAIASHLS-KRTDNEIKNYWNT 50
                                  89********************.*********.***********97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.607.2E-23257IPR009057Homeodomain-like
PROSITE profilePS5129423.922256IPR017930Myb domain
SuperFamilySSF466895.53E-14262IPR009057Homeodomain-like
SMARTSM007173.7E-15654IPR001005SANT/Myb domain
PfamPF002491.2E-14750IPR001005SANT/Myb domain
CDDcd001674.09E-11952No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIASHLSKRT DNEIKNYWNT RLKKRLVKMG  60
IDPTTHKPKN HGLGCSQPKD IANLSHMAQW ESARLEAEAR IVRESKLISA SQITTAHPPP  120
LGRLPCLDIL KVWQGTWRTT GKDLNAPAFF AANINLESPT SILNFSNNII HENTIATDYV  180
GNPIPCMDGG NAHDEEEKDK MGNIMQLQVH DHITDPNTST YASDSLRFPS FLDGFMADSG  240
LFEDSKMNNY WSNILNVVNS PMGSPVF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011075641.15e-88myb-related protein 306-like
TrEMBLA0A059PRS51e-114A0A059PRS5_SALMI; MYB-related transcription factor
STRINGEOY018541e-75(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154