PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100175210041
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 129aa    MW: 14854 Da    PI: 9.3623
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100175210041genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.91.2e-052957839
                                  HHHHHHHHHHHHHHHHHCTSCCC...TTS-ST CS
                           HLH  8 rErrRRdriNsafeeLrellPkaskapskKls 39
                                   Er RR    +++++Lr+l+P++   ++ K++
  Ote100175210041|100175210041 29 YERTRRMLSSDSYDTLRSLIPNP---TKSKNT 57
                                  6*********************9...666655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.4E-61360IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    Send to blast
MEEQSYGVAA ADNIGNDTSA RRYTRRFVYE RTRRMLSSDS YDTLRSLIPN PTKSKNTEVD  60
VRIKDRQVTV KMVQKKRINC LLYVCKVLDE FQMDLHHVAG GINGDYYAYL FKSKICEKAI  120
SIAACKTLD
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By UV treatment. {ECO:0000269|PubMed:12679534}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012831432.14e-29PREDICTED: transcription factor bHLH91-like isoform X2
SwissprotQ84TK16e-24BH010_ARATH; Transcription factor bHLH10
TrEMBLA0A022RP709e-28A0A022RP70_ERYGU; Uncharacterized protein
TrEMBLA0A4D9A0K02e-27A0A4D9A0K0_SALSN; Uncharacterized protein
STRINGMigut.N01686.1.p2e-28(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA26962351
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Cui J, et al.
    Feedback Regulation of DYT1 by Interactions with Downstream bHLH Factors Promotes DYT1 Nuclear Localization and Anther Development.
    Plant Cell, 2016. 28(5): p. 1078-93
    [PMID:27113773]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]