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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Ote100174440031 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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| Family | WRKY | ||||||||
| Protein Properties | Length: 211aa MW: 23950.7 Da PI: 6.31 | ||||||||
| Description | WRKY family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | WRKY | 32.2 | 2.2e-10 | 50 | 70 | 2 | 22 |
--SS-EEEEEEE--TT-SS-E CS
WRKY 2 dDgynWrKYGqKevkgsefpr 22
+D ++WrKYGqK++kgs++pr
Ote100174440031|100174440031 50 SDCWSWRKYGQKPIKGSPYPR 70
699*****************9 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| Gene3D | G3DSA:2.20.25.80 | 1.0E-9 | 39 | 70 | IPR003657 | WRKY domain |
| SuperFamily | SSF118290 | 8.37E-8 | 46 | 71 | IPR003657 | WRKY domain |
| SMART | SM00774 | 2.1E-4 | 49 | 93 | IPR003657 | WRKY domain |
| PROSITE profile | PS50811 | 12.381 | 50 | 119 | IPR003657 | WRKY domain |
| Pfam | PF03106 | 5.7E-6 | 51 | 70 | IPR003657 | WRKY domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
| GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 211 aa Download sequence Send to blast |
MQEVDKPNLE FLSTAEIHTN KKRKMRERIV VAVKIEENAK KQHRNEGPPS DCWSWRKYGQ 60 KPIKGSPYPR LIKSGDVQLC MQGVLQVQHI QGLLGQEASG EMQNRFIEAH HHLHIHPQPP 120 WPGIXXXXXX XXXSAAGLAE SPPTTPNQEQ KQESETTIDE IDEIPSTVSE DNVQSPLITT 180 SDRENELPTS SFFTAFMKNS LREERIAVNL S |
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Asterids | OGEA11281 | 20 | 25 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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