PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100171950071
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family MYB_related
Protein Properties Length: 277aa    MW: 31102.4 Da    PI: 7.5679
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100171950071genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.94.8e-086599137
                                  TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-H CS
               Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtl 37
                                  r +WT+ E++++++a +++  + Wk+I + +g  +t 
  Ote100171950071|100171950071 65 RENWTEPEHDKFLEALQLFDRD-WKKIEAFIG-SKTV 99
                                  789*****************77.*********.8886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.96E-953101IPR009057Homeodomain-like
TIGRFAMsTIGR015574.3E-96399IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.605.1E-46598IPR009057Homeodomain-like
PfamPF002498.2E-66599IPR001005SANT/Myb domain
CDDcd001678.67E-567101No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
MAEKPTPRKR VLSLNANQPE GFYLDQNGMA LPNIGLFSSQ ATGNTTEPED PNKKVRKPYT  60
ITKSRENWTE PEHDKFLEAL QLFDRDWKKI EAFIGSKTVI QSEHNLKLIR IDTLPFLGRM  120
IIQVEEVPLF SYVGFPSLVK STPVPSQERP SFQGSAAVPD VGFARRPDPS TLPRNESAAS  180
IPFWTEKPLQ NTIFSHATGG DSRCAGRTIP YIYSSGSNES TTRTRPTVLP DFTQVYSFIG  240
SVFDPNATGH LQKLKMMDPI ETETVCFLYL ILLVLFT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076102.13e-97protein REVEILLE 6 isoform X3
TrEMBLA0A4D9AUS61e-112A0A4D9AUS6_SALSN; Uncharacterized protein
STRINGMigut.F00285.1.p1e-79(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9982478