PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100169950061

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

bZIP

Protein Properties

Length: 367aa MW: 40212 Da PI: 9.8372

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100169950061	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	45.8	1.4e-14	232	283	5	56
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++ N+ L+k+ ee+ ++ Ote100169950061\|100169950061 232 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEDNELLQKKQEEMMEMQ 283 79****************************************9999998875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.3E-11	228	292	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.036	230	281	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.0E-10	232	282	No hit	No description
Pfam	PF00170	6.8E-13	232	284	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	4.6E-14	232	281	No hit	No description
CDD	cd14707	7.42E-27	232	286	No hit	No description
PROSITE pattern	PS00036	0	235	250	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009414	Biological Process	response to water deprivation
GO:0009651	Biological Process	response to salt stress
GO:0009738	Biological Process	abscisic acid-activated signaling pathway
GO:0010255	Biological Process	glucose mediated signaling pathway
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0000976	Molecular Function	transcription regulatory region sequence-specific DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence Send to blast
MSKESVAGND RTSEVAAFGV PQRQQTLGEI TLEEFLVRAG VVREEAQLAS NNPGIFGDLW 60 HPVNSSSGLG FGFQQQQPSR NGGLINVGVS DNNNQMAATS LPLNVNGIRS AAQQLENHQQ 120 RQQQQILPKQ SNLAYGSAMG IPSNGQLGSP RIRGGMVGIS DPTMNNSPVH NSGLQGGGIG 180 MVGLSSNGSP AVSSDGISKS NGDTSSVSPV PYVFNGGLRG RKSAALEKVV ERRQRRMIKN 240 RESAARSRAR KQAYTMELEA EVAKLKEDNE LLQKKQEEMM EMQKNQWMAM DSIFHMKSVL 300 TIRRSFKYFY FNPSYNLTAL TYHTFSSGDD ETAERGEEAM LEKDTDGSMV RRWRCSVNSS 360 LRSIAKN

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence Send to blast

MSKESVAGND RTSEVAAFGV PQRQQTLGEI TLEEFLVRAG VVREEAQLAS NNPGIFGDLW  60
HPVNSSSGLG FGFQQQQPSR NGGLINVGVS DNNNQMAATS LPLNVNGIRS AAQQLENHQQ  120
RQQQQILPKQ SNLAYGSAMG IPSNGQLGSP RIRGGMVGIS DPTMNNSPVH NSGLQGGGIG  180
MVGLSSNGSP AVSSDGISKS NGDTSSVSPV PYVFNGGLRG RKSAALEKVV ERRQRRMIKN  240
RESAARSRAR KQAYTMELEA EVAKLKEDNE LLQKKQEEMM EMQKNQWMAM DSIFHMKSVL  300
TIRRSFKYFY FNPSYNLTAL TYHTFSSGDD ETAERGEEAM LEKDTDGSMV RRWRCSVNSS  360
LRSIAKN

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00186	DAP	Transfer from AT1G45249	Download

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011083869.1	1e-128	bZIP transcription factor 23
Refseq	XP_011083870.1	1e-128	bZIP transcription factor 23
Swissprot	Q9M7Q4	1e-74	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A4D9BD44	1e-151	A0A4D9BD44_SALSN; ABA responsive element binding factor
STRING	XP_009795221.1	1e-104	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA776	24	97

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]