PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100169760051 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | MYB_related | ||||||||
Protein Properties | Length: 135aa MW: 15369.2 Da PI: 10.1366 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 34.9 | 3.5e-11 | 3 | 36 | 12 | 47 |
HHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 12 lvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 + +++ ++G++ W+ Ia+ ++ gR+++ +k++w++ Ote100169760051|100169760051 3 IMEGHLRFGNR-WSEIAKQIP-GRSENAVKNHWNSI 36 678999*****.*********.***********975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 17.255 | 1 | 41 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.3E-12 | 2 | 36 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.09E-9 | 2 | 42 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 1.47E-7 | 2 | 37 | No hit | No description |
Pfam | PF00249 | 9.7E-10 | 2 | 36 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 135 aa Download sequence Send to blast |
MLIMEGHLRF GNRWSEIAKQ IPGRSENAVK NHWNSIKRRL SSKKRIKRPA NLRNLYQSNI 60 LENYIKNKFF NTTNSPPQLD QNNAFISTTA TNLPLFVDDG GNADNASSTS YFVAETVDEE 120 MSFLRSLFGD INVGN |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A4D9B5P7 | 7e-29 | A0A4D9B5P7_SALSN; Uncharacterized protein |