PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100169760051
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family MYB_related
Protein Properties Length: 135aa    MW: 15369.2 Da    PI: 10.1366
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100169760051genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.93.5e-113361247
                                  HHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
               Myb_DNA-binding 12 lvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                                  + +++ ++G++ W+ Ia+ ++ gR+++ +k++w++ 
  Ote100169760051|100169760051  3 IMEGHLRFGNR-WSEIAKQIP-GRSENAVKNHWNSI 36
                                  678999*****.*********.***********975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129417.255141IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.3E-12236IPR009057Homeodomain-like
SuperFamilySSF466891.09E-9242IPR009057Homeodomain-like
CDDcd001671.47E-7237No hitNo description
PfamPF002499.7E-10236IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    Send to blast
MLIMEGHLRF GNRWSEIAKQ IPGRSENAVK NHWNSIKRRL SSKKRIKRPA NLRNLYQSNI  60
LENYIKNKFF NTTNSPPQLD QNNAFISTTA TNLPLFVDDG GNADNASSTS YFVAETVDEE  120
MSFLRSLFGD INVGN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A4D9B5P77e-29A0A4D9B5P7_SALSN; Uncharacterized protein