PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100168600061 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 240aa MW: 26560.4 Da PI: 6.041 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.5 | 1e-12 | 71 | 118 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h +Er+RRd++++ f L +++P + kKl+Ka+ Le A++Y+k Lq Ote100168600061|100168600061 71 QDHVVAERKRRDNLRQLFISLSKVVPGL-----KKLDKASLLEDAINYLKVLQ 118 56999***********************.....9****************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 15.008 | 68 | 117 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 3.3E-10 | 71 | 118 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.7E-14 | 72 | 128 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 7.74E-12 | 73 | 121 | No hit | No description |
SuperFamily | SSF47459 | 1.96E-15 | 73 | 130 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.4E-11 | 74 | 123 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd04873 | 0.0026 | 163 | 204 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence Send to blast |
MEIFEQNFDE IFDFNPILAE IYSNSSSSTS GVSDHGGANP AAAAFDQLRM NDVFGKRERA 60 SPATRTPLQA QDHVVAERKR RDNLRQLFIS LSKVVPGLKK LDKASLLEDA INYLKVLQER 120 VIALEKEETI DNASSSFLTS YSDSSCGLSS AEISVRISDK NVLIKICCKK QMGLMSRIPC 180 EMERMHLSVI DIRIMPFGGA ALDVTILAEM QSGFLGTVKD IVDHLQAVVG QVEGRRDKHP |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011080799.1 | 4e-59 | transcription factor bHLH18-like isoform X2 | ||||
Refseq | XP_012854699.1 | 5e-59 | PREDICTED: transcription factor bHLH18-like | ||||
Refseq | XP_020550664.1 | 5e-59 | transcription factor bHLH18-like isoform X1 | ||||
TrEMBL | A0A4D9ARZ2 | 9e-77 | A0A4D9ARZ2_SALSN; Uncharacterized protein | ||||
STRING | Migut.C01371.1.p | 2e-58 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA8864 | 16 | 28 |