PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Ote100167440021 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 143aa MW: 16015.7 Da PI: 7.8443 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 30.7 | 6.3e-10 | 122 | 143 | 1 | 22 |
---SS-EEEEEEE--TT-SS-E CS WRKY 1 ldDgynWrKYGqKevkgsefpr 22 ldDgy WrKYGqK++ g+++pr Ote100167440021|100167440021 122 LDDGYGWRKYGQKDILGAKHPR 143 59*******************9 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 10.716 | 117 | 143 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 1.6E-7 | 120 | 143 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.92E-7 | 121 | 143 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.5E-6 | 123 | 143 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 143 aa Download sequence Send to blast |
MENFPSDSDL KNLVRELSQG RDLAKQLQNQ LNFQSSSSRE NQEFLLQRIL FSYDHALSML 60 THNDGADVLP PPPVASDSPR SLAGSPQSGE SDQDHPSRKR KTVERWSEKV KVRGGGGIEG 120 QLDDGYGWRK YGQKDILGAK HPR |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_011076029.1 | 5e-43 | probable WRKY transcription factor 30 | ||||
TrEMBL | A0A4D9AHG8 | 2e-56 | A0A4D9AHG8_SALSN; Uncharacterized protein | ||||
STRING | XP_010097859.1 | 1e-37 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA11743 | 19 | 22 |