PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100165210021

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

bHLH

Protein Properties

Length: 289aa MW: 32993.5 Da PI: 4.8513

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100165210021	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.4	7.9e-11	213	253	10	55
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+RR+riN+++ L+ l+P+ +K++ +++Le+Av+Y+k Lq Ote100165210021\|100165210021 213 RKRRERINERLKILQNLVPNG-----TKVDISTMLEEAVHYVKFLQ 253 9****************97.....8****************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	15.015	203	252	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	1.96E-14	204	269	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	5.9E-13	208	266	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.5E-11	209	258	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	7.23E-12	212	257	No hit	No description
Pfam	PF00010	3.7E-8	213	253	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence Send to blast
MEIVGSFVDE DWESLSQIFS SGEENTDFFV HCDDDGSKLF SSNIQISPPT FDHAFAPNFF 60 STPQESSSNS TQFDEALFLN AHEDQLQLQQ PLQDHESFIN NDVFMLPVYP HFQGQHQNVE 120 TADSCQEMTL KRRKSQELFV QIQDDYSPNK KQRFSKNAHK SRKTKKIIQD KINEEGEGNG 180 GGNSSEDDSN ASQVVTNTKT RASATDPQSI YARKRRERIN ERLKILQNLV PNGTKVDIST 240 MLEEAVHYVK FLQLQIKLLS SDNLWMYAPL AYNGMDIGIY QNISPNLRP

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020547594.1	3e-73	transcription factor bHLH54
Swissprot	Q7XHI9	1e-50	BH084_ARATH; Transcription factor bHLH84
TrEMBL	A0A4D9BAY4	1e-72	A0A4D9BAY4_SALSN; Uncharacterized protein
STRING	Migut.C00492.1.p	1e-68	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA639	22	101