PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100156520231 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | SRS | ||||||||
Protein Properties | Length: 218aa MW: 23315 Da PI: 4.5034 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 99.5 | 6.4e-31 | 69 | 154 | 68 | 154 |
DUF702 68 aeaaskrkrelkskkqsalsstklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLy 148 kr+re+ +++++l +t +++++s +e+ ++Peevs+eavfrcvr+++vddge+++aY+tav+i+GhvfkGiLy Ote100156520231|100156520231 69 XXXXXKRQREN-PTTSTSLVCTPIPTSTSALGVEVGNFPEEVSAEAVFRCVRMNAVDDGEDQYAYHTAVNISGHVFKGILY 148 44556777765.9999***************************************************************** PP DUF702 149 dqGlee 154 dqG+e+ Ote100156520231|100156520231 149 DQGTEA 154 ***986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05142 | 4.1E-26 | 66 | 153 | IPR007818 | Protein of unknown function DUF702 |
TIGRFAMs | TIGR01624 | 2.1E-27 | 105 | 151 | IPR006511 | Lateral Root Primordium type 1, C-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence Send to blast |
MAGFFSLGGG GGRDHHNPSS DINPESWFLY RNDEIPSYRS DAREEHVGSG GQEAGXXXXX 60 XXXXXXXXXX XXXKRQRENP TTSTSLVCTP IPTSTSALGV EVGNFPEEVS AEAVFRCVRM 120 NAVDDGEDQY AYHTAVNISG HVFKGILYDQ GTEAQYMAAE GGESSSGAGV QHHNLITATA 180 DNTAAAGSGP PSPYIDPSLF PAPLSFMAGT QFFTPPRS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator involved in the transcriptional regulation of terpene biosynthesis in glandular trichomes (PubMed:24884371, PubMed:24142382). Binds to the promoter of the linalool synthase TPS5 and promotes TPS5 gene transactivation (PubMed:24884371, PubMed:24142382). Acts synergistically with MYC1 in the transactivation of TPS5 (PubMed:24884371). {ECO:0000269|PubMed:24142382, ECO:0000269|PubMed:24884371}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011090405.1 | 2e-52 | protein SHI RELATED SEQUENCE 1-like | ||||
Swissprot | K4B6C9 | 6e-41 | EOT1_SOLLC; Protein EXPRESSION OF TERPENOIDS 1 | ||||
TrEMBL | A0A4D8YTI2 | 2e-53 | A0A4D8YTI2_SALSN; Uncharacterized protein | ||||
STRING | XP_009628752.1 | 7e-45 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA18294 | 2 | 4 |
Publications ? help Back to Top | |||
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