PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100156470051
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 234aa    MW: 25923 Da    PI: 8.7621
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100156470051genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.10.00018161203855
                                   HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                   r rrR +++ +++  L++l+ +      +K + a++L +A   Ik Lq
  Ote100156470051|100156470051 161 RSRRRSQKLTDKITALQKLVSPY-----GKTDTASVLLEASVSIKALQ 203
                                   569******************99.....9***********99999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.915153202IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.95E-4155207No hitNo description
SuperFamilySSF474591.57E-7161212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.4E-6162213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MPFFPASLHT PTPAMFSGCN EVLTETPSSI SSNLVYNDNS FLSFYGDFSS AHAQSSCSIY  60
VSGTAPNSQG ETQLNYMPVQ EDIFYQPWES NYVQPSNNEI QLIQNARKKD VSKKNIARKR  120
SAEDASRSLI KSATGNTDGE KKTPAQFQGK LPNIHKEKEP RSRRRSQKLT DKITALQKLV  180
SPYGKTDTAS VLLEASVSIK ALQDQIEDIF HKISGEQTTN MEKKDLTFKA GACA
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1544456