PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100156430051 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 202aa MW: 22844.2 Da PI: 4.6858 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12 | 0.0004 | 30 | 63 | 7 | 51 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYI 51 E+ RR+++N+++ Lr+++ ka ++++ A+eYI Ote100156430051|100156430051 30 VSEKIRRKKLNDRLYALRSVMDKA-----------STVKDAIEYI 63 569***************998655...........7777777777 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 2.74E-6 | 26 | 71 | No hit | No description |
SuperFamily | SSF47459 | 2.75E-10 | 26 | 83 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 4.9E-6 | 29 | 72 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 4.0E-6 | 30 | 87 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence Send to blast |
MLLQLDELGC SYMEERVSVG GEGGLSRNIV SEKIRRKKLN DRLYALRSVM DKASTVKDAI 60 EYIEWMHSEE RRIQAEIWEM ESKTRMENTD YSCVSTSAPS LXXXXXXXXI QILELRVRSM 120 REEKMIVVSL TCSKAGRDDA LVKLCEMFES LNLQIITATI SSSSGRLCNT LLLQGDDEEE 180 VLSFKIKTAI EALNDPGSSI SI |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011094110.1 | 7e-55 | transcription factor bHLH35 | ||||
Swissprot | Q2HIV9 | 1e-39 | BH035_ARATH; Transcription factor bHLH35 | ||||
TrEMBL | A0A4D9BI30 | 3e-55 | A0A4D9BI30_SALSN; Uncharacterized protein | ||||
STRING | XP_009603227.1 | 5e-51 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2923 | 24 | 51 |