PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100156000021 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | C2H2 | ||||||||
Protein Properties | Length: 250aa MW: 27567.9 Da PI: 5.442 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.4 | 0.00048 | 36 | 58 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+dCg sF+++ L H ++H Ote100156000021|100156000021 36 HKCSDCGNSFRTHQALGGHRSSH 58 79**************9999998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57667 | 5.87E-5 | 34 | 62 | No hit | No description |
PROSITE profile | PS50157 | 10.949 | 36 | 63 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 2.0E-7 | 36 | 59 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 38 | 58 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence Send to blast |
GPLINLAILE KDKEEGEENL PENQDSGDRV NNSDEHKCSD CGNSFRTHQA LGGHRSSHNK 60 TRSTIFNTXX XXXXXXXXXX XXNRRRKSSS STSNNNKEKA STSSSVTFDI DLNLSPKEDE 120 DDVHAGSDAP SSSTNTRIPA EKEDTPITTG IQEEEKVKIA DGSGFILKGW STTDKRGRPA 180 AADEEDEEVL AAAVQLMKMH EDGVMKLQEK EKTMLKIQEK KPAEKKSGGL KCGECGKFVH 240 IPDHLNSEVK |