PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100155620021

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

FAR1

Protein Properties

Length: 732aa MW: 83115.1 Da PI: 7.9129

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100155620021	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	35	4.6e-11	616	653	54	91
FAR1 54 traetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +r+etr+gC+a++ v+k ++gkw vtk+++eH+H+l+p Ote100155620021\|100155620021 616 QRVETRVGCRAMILVRKVSSGKWTVTKFVKEHTHPLTP 653 799********************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03094	1.6E-86	2	251	IPR004326	Mlo-related protein
Pfam	PF03101	1.3E-8	616	653	IPR004330	FAR1 DNA binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006952	Biological Process	defense response
GO:0016021	Cellular Component	integral component of membrane

Sequence ? help Back to Top
Protein Sequence Length: 732 aa Download sequence Send to blast
MTMQRQSTFV RVHTSNPMQR NGFLVWVTCF FRQFGRSVVR ADYLTLRQGF ITNHNLTSKY 60 DFHSYMIRSM EEEFQRIVGV SGPLWGFVVA FMLFNVKGSN LYFWIALIPV TLVLLVGTKL 120 QHVIATLALE SAGITGSFNG HKFRPRDELF WFNKPELLLS LIHFILFQWQ FGYNSCFIRN 180 HFLVYLRLFL GFAGQFLCSY STLPLYALVT QMGTNYKAAL IPRTIRETIH GWGKAARRRR 240 KLGIYADDST IHTDTSTVVS VEEYDDHELI DSPRFAPRSG AEIELQESGV ATSDQSPPAA 300 NETSSRIGTP LLRPSASVSV SSLVDLRILS ELSPRASSMP RLIDEAYRRN GSARSKHLRK 360 NSKVGPLKDD TGQTQSSNRH SRGPVENSFK SYTTIDDMFG AALETLSQWS SRQDQWKLVA 420 STMVHHTNAR VNMLETFGTS RSMYNTRGNL RADYERNFAI APAAAPTPFG QSPFCKSAAA 480 TTPIPFLTPP RLPSPESYRG RYSLIEILMD YEISGDVNGE VVGSSTNFEG RTDDDDTIVR 540 SSADVVLQQG LDIKVDEDSV ERELFELDEL QDVNCAISVD EPYVGQEFES EAAAHXXXXX 600 XXXXRMPQES VLSFVQRVET RVGCRAMILV RKVSSGKWTV TKFVKEHTHP LTPGKGRKDL 660 IYDQYPNEHD KIRELSQQLA IEKKKVAAYK RHLEMVFEHI EQHNQSLGKK IQDIMDSVRE 720 MESKEQLDPR FC

Sequence ? help Back to Top

Protein Sequence Length: 732 aa Download sequence Send to blast

MTMQRQSTFV RVHTSNPMQR NGFLVWVTCF FRQFGRSVVR ADYLTLRQGF ITNHNLTSKY  60
DFHSYMIRSM EEEFQRIVGV SGPLWGFVVA FMLFNVKGSN LYFWIALIPV TLVLLVGTKL  120
QHVIATLALE SAGITGSFNG HKFRPRDELF WFNKPELLLS LIHFILFQWQ FGYNSCFIRN  180
HFLVYLRLFL GFAGQFLCSY STLPLYALVT QMGTNYKAAL IPRTIRETIH GWGKAARRRR  240
KLGIYADDST IHTDTSTVVS VEEYDDHELI DSPRFAPRSG AEIELQESGV ATSDQSPPAA  300
NETSSRIGTP LLRPSASVSV SSLVDLRILS ELSPRASSMP RLIDEAYRRN GSARSKHLRK  360
NSKVGPLKDD TGQTQSSNRH SRGPVENSFK SYTTIDDMFG AALETLSQWS SRQDQWKLVA  420
STMVHHTNAR VNMLETFGTS RSMYNTRGNL RADYERNFAI APAAAPTPFG QSPFCKSAAA  480
TTPIPFLTPP RLPSPESYRG RYSLIEILMD YEISGDVNGE VVGSSTNFEG RTDDDDTIVR  540
SSADVVLQQG LDIKVDEDSV ERELFELDEL QDVNCAISVD EPYVGQEFES EAAAHXXXXX  600
XXXXRMPQES VLSFVQRVET RVGCRAMILV RKVSSGKWTV TKFVKEHTHP LTPGKGRKDL  660
IYDQYPNEHD KIRELSQQLA IEKKKVAAYK RHLEMVFEHI EQHNQSLGKK IQDIMDSVRE  720
MESKEQLDPR FC