PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100154470011 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 226aa MW: 25888.2 Da PI: 10.3486 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.8 | 5.2e-10 | 116 | 163 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR+ri +++ L++l+P + +k + Ka +L + ++Y++sLq Ote100154470011|100154470011 116 SHSLAERVRRERISERMKLLQTLVPGC----DKVNGKALMLDEIINYVQSLQ 163 8*************************9....5559****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 1.31E-16 | 110 | 179 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 5.87E-9 | 110 | 167 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 9.9E-16 | 112 | 175 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.218 | 112 | 162 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.8E-7 | 116 | 163 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 4.0E-9 | 118 | 168 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009739 | Biological Process | response to gibberellin | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence Send to blast |
MSISPPHLHQ SPHNKIIANS NFNQQTLLHN FVDNDASVVN KKSMDDSSSI VTPLEKKRKS 60 RAASSPQSKD KREGTRKKQK KLKDDEKKKN NSKEESKAEE AGYIHVRARR GQATDSHSLA 120 ERVRRERISE RMKLLQTLVP GCDKVNGKAL MLDEIINYVQ SLQNQVEFLS MKLASTNPMF 180 YDFGSDLESF MVRPGQGSRQ TLWEMDEHRQ KIINQSGFNN SLFSFH |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011073133.1 | 2e-70 | transcription factor bHLH137 | ||||
Swissprot | Q93W88 | 3e-54 | BH137_ARATH; Transcription factor bHLH137 | ||||
TrEMBL | A0A0H3YB67 | 3e-84 | A0A0H3YB67_SALMI; Basic helix-loop-helix transcription factor | ||||
STRING | Migut.O00350.1.p | 7e-68 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4116 | 23 | 45 |
Publications ? help Back to Top | |||
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