PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100153790021 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | HB-other | ||||||||
Protein Properties | Length: 187aa MW: 21205.1 Da PI: 9.4939 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 46.1 | 8.3e-15 | 54 | 89 | 21 | 56 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++++p++++r eL+k+l+L++rqVk+WFqNrR+++k Ote100153790021|100153790021 54 ECPHPDEKQRLELSKRLSLETRQVKFWFQNRRTQMK 89 589******************************999 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00389 | 8.4E-7 | 46 | 95 | IPR001356 | Homeobox domain |
Pfam | PF00046 | 3.0E-12 | 54 | 89 | IPR001356 | Homeobox domain |
CDD | cd00086 | 4.38E-10 | 54 | 91 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 1.2E-13 | 54 | 99 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.8E-12 | 54 | 96 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50071 | 13.07 | 56 | 91 | IPR001356 | Homeobox domain |
PROSITE pattern | PS00027 | 0 | 66 | 89 | IPR017970 | Homeobox, conserved site |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence Send to blast |
MWGEGGAEMK STRADLGATT WTVHLVMIKK IPTALXXXXX PPTHTAANPR TRIECPHPDE 60 KQRLELSKRL SLETRQVKFW FQNRRTQMKT QLERHENSIL RQENDKLRAE NMSXXXXXXX 120 XRNPICTNCG GTAMIGDVSL EEQHLRIENA RLKEELDRVC TLAGKFLGRP IPALAAAAPV 180 PNSSLEL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in the regulation of the tissue-specific accumulation of anthocyanins and in cellular organization of the primary root. {ECO:0000269|PubMed:10402424}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015961616.1 | 8e-70 | homeobox-leucine zipper protein ANTHOCYANINLESS 2 isoform X1 | ||||
Refseq | XP_016198931.1 | 9e-70 | homeobox-leucine zipper protein ANTHOCYANINLESS 2 isoform X1 | ||||
Swissprot | Q0WV12 | 2e-61 | ANL2_ARATH; Homeobox-leucine zipper protein ANTHOCYANINLESS 2 | ||||
TrEMBL | A0A022R5Y7 | 2e-69 | A0A022R5Y7_ERYGU; Uncharacterized protein (Fragment) | ||||
TrEMBL | A0A061DVH8 | 7e-69 | A0A061DVH8_THECC; HD domain class transcription factor isoform 3 (Fragment) | ||||
TrEMBL | A0A1R3I7T7 | 2e-68 | A0A1R3I7T7_COCAP; Uncharacterized protein | ||||
TrEMBL | A0A314UHE8 | 8e-70 | A0A314UHE8_PRUYE; Uncharacterized protein | ||||
STRING | EOX96069 | 5e-69 | (Theobroma cacao) | ||||
STRING | Migut.N01420.1.p | 3e-70 | (Erythranthe guttata) |
Publications ? help Back to Top | |||
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