PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100153490081
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family WRKY
Protein Properties Length: 288aa    MW: 32561.3 Da    PI: 7.7304
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100153490081genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY36.69e-12112135124
                                   ---SS-EEEEEEE--TT-SS-EEE CS
                          WRKY   1 ldDgynWrKYGqKevkgsefprsY 24 
                                   ldDgynWrKYGqK++ g+ +pr Y
  Ote100153490081|100153490081 112 LDDGYNWRKYGQKDILGAAHPRDY 135
                                   59*********************9 PP
2WRKY47.63.2e-151702131959
                                   SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY  19 efprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                                   +  r+YYrCt++   gC ++k+v+r+++dp+v+e++Y+g+H ++
  Ote100153490081|100153490081 170 NLFRAYYRCTHRhtqGCLATKQVQRADDDPTVFEVIYRGNHSCR 213
                                   5679*******98999*************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.9E-24107132IPR003657WRKY domain
PROSITE profilePS5081116.593107211IPR003657WRKY domain
SuperFamilySSF1182909.29E-9111136IPR003657WRKY domain
SMARTSM007741.3E-34112214IPR003657WRKY domain
PfamPF031066.1E-8113143IPR003657WRKY domain
SuperFamilySSF1182905.23E-13169214IPR003657WRKY domain
PfamPF031067.4E-14169213IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.9E-24173214IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MEKVGVSDKK TVITVLTEGK KLANELKRQL HPTTTSRETC DILVENILSS YENAITLLAL  60
IGSSQVAVEP PNSVEGSPRS EGSGQNCKKR KTLPKWSEQV RVCSGIGSEG QLDDGYNWRK  120
YGQKDILGAA HPRDYCVAYD ICSTTFPVVD RDQSYFSVKL DITLISDRNN LFRAYYRCTH  180
RHTQGCLATK QVQRADDDPT VFEVIYRGNH SCRQERLKQN KISKEEESLM NSHQMMMSTN  240
ESSPIKTELD PKVDRTSSFS FPSTPIEYQN XXXXXXXXXX XXXSSQTS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011093555.12e-90probable WRKY transcription factor 41
TrEMBLA0A0D5Y9961e-104A0A0D5Y996_SALMI; WRKY protein
STRINGMigut.B01847.1.p7e-75(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55532237