PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100149350041 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 123aa MW: 13434.4 Da PI: 9.0121 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.2 | 0.00035 | 75 | 112 | 12 | 54 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L +l+ + +K + a++L +A+ YI+ L Ote100149350041|100149350041 75 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFL 112 6678889999999999998.....8****************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 10.512 | 63 | 112 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.16E-9 | 73 | 118 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 6.4E-7 | 73 | 117 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 4.01E-6 | 73 | 117 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 123 aa Download sequence Send to blast |
MQHKSLENCE RQILNNSSNA AASYAYCAGN IEFAAAKYCA TSEIFMKCNS NSDGGAAKKL 60 KANPITSSQT GIKVRKEKLG DRITALHQLV SPFGKTDTAS VLLEAIGYIR FLHRQIEVTF 120 LCT |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011078299.1 | 2e-34 | transcription factor bHLH68 | ||||
Swissprot | Q8S3D1 | 2e-24 | BH068_ARATH; Transcription factor bHLH68 | ||||
TrEMBL | A0A4D8Y0J2 | 9e-40 | A0A4D8Y0J2_SALSN; Uncharacterized protein | ||||
STRING | XP_007160320.1 | 3e-31 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1519 | 22 | 47 |
Publications ? help Back to Top | |||
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