PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100147760051 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | NAC | ||||||||
Protein Properties | Length: 207aa MW: 23575.5 Da PI: 8.2154 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 111.9 | 6.8e-35 | 14 | 130 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 lppGfrF+Ptdee+v +yL +k+ +++l++ vi+e+d++ ++Pw+Lp e+++yfFs++ g++++r+t sg Ote100147760051|100147760051 14 LPPGFRFQPTDEEIVFQYLSRKTFSHPLPA-LVIPEIDVFGFDPWQLPG---DPEQDMYFFSNHG----CGNESERSTPSG 86 79**************************99.78***************3...456799***9975....57899******* PP NAM 82 yWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +Wkat ++k++ s+ k vg++kt+vfy ++g++tdW+mh+y + Ote100147760051|100147760051 87 FWKATASSKQINSSkKMPIVGIRKTFVFY----RSGVRTDWIMHQYCI 130 ************97344459*********....7999*********86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 7.32E-42 | 12 | 157 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 42.408 | 14 | 157 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.5E-23 | 15 | 129 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence Send to blast |
MDKLNFVRDG GRRLPPGFRF QPTDEEIVFQ YLSRKTFSHP LPALVIPEID VFGFDPWQLP 60 GDPEQDMYFF SNHGCGNESE RSTPSGFWKA TASSKQINSS KKMPIVGIRK TFVFYRSGVR 120 TDWIMHQYCI SLSENNALQG NSLIRIGDWS LCRVFMKKRS RRAEGEERGS NDLWRVDMGD 180 ADSCCASSSS PHSDPNIFSE VSSSSRR |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 7e-32 | 14 | 160 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 7e-32 | 14 | 160 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 7e-32 | 14 | 160 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 7e-32 | 14 | 160 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
3swm_A | 7e-32 | 14 | 160 | 20 | 171 | NAC domain-containing protein 19 |
3swm_B | 7e-32 | 14 | 160 | 20 | 171 | NAC domain-containing protein 19 |
3swm_C | 7e-32 | 14 | 160 | 20 | 171 | NAC domain-containing protein 19 |
3swm_D | 7e-32 | 14 | 160 | 20 | 171 | NAC domain-containing protein 19 |
3swp_A | 7e-32 | 14 | 160 | 20 | 171 | NAC domain-containing protein 19 |
3swp_B | 7e-32 | 14 | 160 | 20 | 171 | NAC domain-containing protein 19 |
3swp_C | 7e-32 | 14 | 160 | 20 | 171 | NAC domain-containing protein 19 |
3swp_D | 7e-32 | 14 | 160 | 20 | 171 | NAC domain-containing protein 19 |
4dul_A | 7e-32 | 14 | 160 | 17 | 168 | NAC domain-containing protein 19 |
4dul_B | 7e-32 | 14 | 160 | 17 | 168 | NAC domain-containing protein 19 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator of the mannan synthase CSLA9. Recognizes and binds to DNA-specific sequence of CSLA9 promoter. {ECO:0000269|PubMed:24243147}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011073111.1 | 1e-67 | NAC domain-containing protein 83 | ||||
Swissprot | O22798 | 1e-49 | NAC41_ARATH; NAC domain-containing protein 41 | ||||
TrEMBL | A0A4D8ZWT5 | 1e-84 | A0A4D8ZWT5_SALSN; Uncharacterized protein | ||||
STRING | Migut.D01296.1.p | 1e-65 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1387 | 23 | 77 |
Publications ? help Back to Top | |||
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