PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100147490081 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 149aa MW: 17050.2 Da PI: 7.5059 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.6 | 3.5e-11 | 39 | 80 | 8 | 54 |
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + r+RR+ri ++f+ Lr+l+P K++ +++Le+A++Y+k L Ote100147490081|100147490081 39 AARQRRHRISHRFQILRSLVPGG-----SKMDTVSMLEEAIQYVKFL 80 569******************95.....5****************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 15.834 | 31 | 80 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.57E-14 | 36 | 89 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.22E-14 | 37 | 84 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 3.1E-12 | 37 | 84 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.0E-13 | 37 | 86 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.2E-8 | 40 | 80 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence Send to blast |
MMVSSSSSNP SSCDSTSAAA KEKAKEKKVK LSTDPQSVAA RQRRHRISHR FQILRSLVPG 60 GSKMDTVSML EEAIQYVKFL KNQIWLLHHA MINFVGDPSF SSSQPDSCGV LPFDRREFDF 120 YYNYDEVDCG RMELPESWFS GEENWAMQR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018859333.1 | 3e-37 | PREDICTED: transcription factor bHLH140-like | ||||
Swissprot | Q9M041 | 2e-27 | BH140_ARATH; Transcription factor bHLH140 | ||||
TrEMBL | A0A4D9A700 | 2e-49 | A0A4D9A700_SALSN; Aprataxin | ||||
STRING | XP_010264777.1 | 3e-34 | (Nelumbo nucifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA11714 | 17 | 23 |
Publications ? help Back to Top | |||
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