PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100147450021 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | Dof | ||||||||
Protein Properties | Length: 233aa MW: 26107.6 Da PI: 8.7938 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 75.7 | 6e-24 | 62 | 99 | 26 | 63 |
zf-Dof 26 lsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 lsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss Ote100147450021|100147450021 62 LSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSS 99 79********************************9875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 2.0E-10 | 26 | 86 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 17.439 | 42 | 96 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 3.0E-18 | 62 | 96 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence Send to blast |
MDTAQWPQGI EFVKTGTEIS DSNSKPNAAV EKKPRPQKEQ ALXXXXXXXX XXXXXXXXXX 60 XLSQPRYFCK TCRRYWTEGG SLRNVPVGGG SRKNKRSSSA AVAAPAKKAL NDLSLPNFSP 120 QNPRIQQGHD LNLAYNPPSH YTAVSEFQNN LPLMELLKTG NMSSFMSAPI AAPDFKPGLE 180 YGXXXXXXXX EDQPSRINVF PFEGLKRVSN NEQFEEERET NGYWNGMLAG GCW |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011075948.1 | 4e-57 | dof zinc finger protein DOF4.6-like | ||||
TrEMBL | A0A4D8ZWA9 | 2e-66 | A0A4D8ZWA9_SALSN; Uncharacterized protein | ||||
STRING | XP_007136465.1 | 2e-50 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA88 | 24 | 419 |