PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100143370031 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 258aa MW: 29150 Da PI: 4.6919 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32.4 | 1.6e-10 | 182 | 222 | 10 | 55 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+RR+riN+++ L++l+P+ +K++ +++Le+Av Y+k Lq Ote100143370031|100143370031 182 RKRRERINERLKILQTLVPNG-----TKVDISTMLEEAVGYVKFLQ 222 9******************97.....8******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 14.926 | 172 | 221 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 5.5E-14 | 174 | 238 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.7E-12 | 176 | 237 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.9E-11 | 178 | 227 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 3.42E-12 | 181 | 226 | No hit | No description |
Pfam | PF00010 | 5.6E-8 | 182 | 222 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence Send to blast |
MEDVAAMPQG EWSSLTGMCF EEADFMAQFS IPNELLNDTN FLVSPTIWPT HRETAMYSCE 60 ETNTNMRISG CSGGSSFTFP EESYYSVTNN SLTTMDYYCT VEGKNDFLNQ DVPRNKKIKF 120 NTKFEDSDDX XXXXXXGIAV FQRQSSSNCC SEDESNGTAS RSASKATRKT RAATDPQSLY 180 ARKRRERINE RLKILQTLVP NGTKVDISTM LEEAVGYVKF LQLQIKLLSS DEHWMYAPIA 240 YNGMDIGLDL KMAIPKPQ |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012836777.1 | 3e-81 | PREDICTED: transcription factor bHLH54-like | ||||
TrEMBL | A0A022RB65 | 7e-80 | A0A022RB65_ERYGU; Uncharacterized protein | ||||
STRING | Migut.B00443.1.p | 6e-82 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA639 | 22 | 101 |