PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100141300101
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family ERF
Protein Properties Length: 390aa    MW: 42782.3 Da    PI: 4.4909
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100141300101genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP226.41.7e-081461722955
                           AP2  29 krfslgkfgtaeeAakaaiaarkkleg 55 
                                    r++lg+f taeeAa+a++  +++++g
  Ote100141300101|100141300101 146 VRVWLGTFNTAEEAARAYDTEARRIRG 172
                                   79**********************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103215.65992180IPR001471AP2/ERF domain
SMARTSM003801.5E-13111186IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.2E-18142181IPR001471AP2/ERF domain
CDDcd000184.50E-17142182No hitNo description
SuperFamilySSF541712.22E-11143181IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001666Biological Processresponse to hypoxia
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    Send to blast
MCGGAMISDF VTPASRSSTR LTADLLWGSA AAGLHRKKNR GSYDSKPRRS APIIHLDDDF  60
EADFQDFKDH SDDEDDLDVK KQFSFSASKS SGFKGIKLTL LNLMKSLISP QKERGKISTE  120
ESDSDHGGNG XXXXXXXXXX XPRKGVRVWL GTFNTAEEAA RAYDTEARRI RGKKAKVNFP  180
ENAPPAASRF TVKSNSCQGI PKQSLESVQP NGNSSFMNMQ NNDYYDSVVS IEEKPEMKPF  240
GHADAYPSAD ESGLKPLTPT NGANVYFSSD QGSNSFDCSD FGWGENCART PEISSLLSTV  300
LEDVQDAGPA KKAKIDPDNH VSDDENTANN LSDDLSEFDS QMKLFQMPYL ENNWDATLDA  360
LLCGDATQDG GNAMDLWSFD DVPAMMGSLY
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011072679.11e-172ethylene-responsive transcription factor RAP2-12-like isoform X1
TrEMBLA0A2G9GX081e-169A0A2G9GX08_9LAMI; Uncharacterized protein
STRINGMigut.I01124.1.p1e-145(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14462466