PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100135820011 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | ERF | ||||||||
Protein Properties | Length: 102aa MW: 11653.2 Da PI: 11.4405 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.6 | 1e-15 | 62 | 102 | 1 | 45 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAaka 45 s y+GVr + +g+Wv+eIr+p++ + r++lg+f tae+Aa+a Ote100135820011|100135820011 62 SVYRGVRMRA-WGKWVSEIREPKK---KSRIWLGTFATAEMAARA 102 78*****998.**********854...6***************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 1.11E-14 | 62 | 102 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 1.5E-9 | 62 | 102 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.51E-19 | 62 | 102 | No hit | No description |
PROSITE profile | PS51032 | 17.886 | 63 | 102 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 4.2E-12 | 63 | 102 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 6.9E-22 | 63 | 102 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.4E-11 | 64 | 75 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.4E-11 | 86 | 102 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 102 aa Download sequence Send to blast |
MAXXXXXXXX XXXXXXXXXX TVSGSDSVPG PVNKLKRARD NDCKDSAHKR NKXXXXXXXP 60 HSVYRGVRMR AWGKWVSEIR EPKKKSRIWL GTFATAEMAA RA |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011093630.1 | 2e-23 | ethylene-responsive transcription factor TINY-like | ||||
TrEMBL | A0A4D9AHT5 | 2e-20 | A0A4D9AHT5_SALSN; EREBP-like factor | ||||
STRING | Migut.K00522.1.p | 2e-20 | (Erythranthe guttata) |