PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100131690111
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family ARR-B
Protein Properties Length: 350aa    MW: 39483.4 Da    PI: 4.8619
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100131690111genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like51.71.9e-16193237555
                       G2-like   5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                   +Wt+eLH+ F++av++L G+      +ilelm+v+gLt+ +v+SHLQk R+
  Ote100131690111|100131690111 193 DWTQELHDLFMDAVQKL-GEG-----NILELMNVPGLTRMQVASHLQKCRS 237
                                   7****************.555.....6*********************996 PP
2Response_reg24.61.2e-0991101103
                                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEES CS
                  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvta 79 
                                   vl+vd   +v++ +  +le+  + +v++++ ++  l +l +    +D+++  i+ p++ G++ll+   e++  l +i++  
  Ote100131690111|100131690111   9 VLLVDHAASVLDPIVLILEHFFL-KVTTVKYASTGLSILSRGSpkVDVVMENIKSPDLCGFKLLQDAVERD--LHVILLLE 86 
                                   899****************9999.***************988888********************998877..******** PP

                                   TTTHHHHHHHHHTTESEEEESS-- CS
                  Response_reg  80 hgeeedalealkaGakdflsKpfd 103
                                   +++  +++ a++aGa  +++Kp  
  Ote100131690111|100131690111  87 EDDYVLTKMAVEAGALICITKPLT 110
                                   **********************75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23007.4E-115112No hitNo description
SuperFamilySSF521723.56E-106113IPR011006CheY-like superfamily
PROSITE profilePS5011018.2028122IPR001789Signal transduction response regulator, receiver domain
PfamPF000725.2E-59110IPR001789Signal transduction response regulator, receiver domain
CDDcd001569.14E-610111No hitNo description
SuperFamilySSF466892.2E-12189236IPR009057Homeodomain-like
TIGRFAMsTIGR015572.5E-16192237IPR006447Myb domain, plants
PfamPF002491.3E-6193235IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.0E-15193237IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MFEKRRLNVL LVDHAASVLD PIVLILEHFF LKVTTVKYAS TGLSILSRGS PKVDVVMENI  60
KSPDLCGFKL LQDAVERDLH VILLLEEDDY VLTKMAVEAG ALICITKPLT MGMADCLWQI  120
VVGENLRRIR HXXXXXXXXX XXXXXXXXXX VIQEQEQIMS MEATCCDMIS DESSLEETII  180
SSANNAGTKV WTDWTQELHD LFMDAVQKLG EGNILELMNV PGLTRMQVAS HLQKCRSGTW  240
VPPNKRKAKV ISGANRENRS CNSRRFGFMP TSSHHHLHPS NVDVVDASAT LHSYDEYNYF  300
DEFPNIDSMI EGSCLFDDAV PVMIKNSDVD KWEEATEADG AKNRVVIKEE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011091822.16e-74two-component response regulator ARR14-like isoform X1
RefseqXP_011091823.15e-74two-component response regulator ARR14-like isoform X2
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8132384