PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100131690101

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

ARR-B

Protein Properties

Length: 390aa MW: 44180.3 Da PI: 6.5745

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100131690101	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	63.6	3.7e-20	188	238	4	55
G2-like 4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +Wt eLH++F+ a +qL G+ k Pk +lelm+v+gLt+ +v+SHLQk R Ote100131690101\|100131690101 188 TEWTVELHAKFMAAAKQL-GQGKCYPKDVLELMNVPGLTRMQVASHLQKCRN 238 58**************.9***************************995 PP
2	Response_reg	22.8	4.6e-09	10	109	1	101
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvta 79 vl+v+ e + r+ + ++l+ y e+++++ ++ al +l + + ++ i+ i+ p++ +++ll e ++ ++l +i++ + Ote100131690101\|100131690101 10 VLLVEHETKDRDTIMNMLNYFSY-EATSVKLASTALSILSKGKvnFNFIVANINSPDLLAFQLLHEATK--MNLGVIFMLD 87 899******************.***********999989***********999998777..55**** PP TTTHHHHHHHHHTTESEEEESS CS Response_reg 80 hgeeedalealkaGakdflsKp 101 ++e+++ a++ Ga +++K Ote100131690101\|100131690101 88 VDDEATTRMAVEQGALLCVTKS 109 ******************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF52172	2.7E-9	7	139	IPR011006	CheY-like superfamily
Gene3D	G3DSA:3.40.50.2300	6.4E-11	7	147	No hit	No description
PROSITE profile	PS50110	18.538	9	123	IPR001789	Signal transduction response regulator, receiver domain
CDD	cd00156	2.03E-5	11	108	No hit	No description
PROSITE profile	PS51294	9.287	182	241	IPR017930	Myb domain
SuperFamily	SSF46689	4.12E-14	183	237	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	3.8E-20	185	238	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.9E-16	188	238	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0000160	Biological Process	phosphorelay signal transduction system
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence Send to blast
MLTCRKNVHV LLVEHETKDR DTIMNMLNYF SYEATSVKLA STALSILSKG KVNFNFIVAN 60 INSPDLLAFQ LLHEATKMNL GVIFMLDVDD EATTRMAVEQ GALLCVTKSM IMGILGCLWQ 120 FMLHKRASKT PQALQEKELR KCVVESNPNT NISNSEQNYK SMEKYSENEG GRLKKSGGGG 180 RLKRKDWTEW TVELHAKFMA AAKQLGQGKC YPKDVLELMN VPGLTRMQVA SHLQKCRNAS 240 WLPPNERKQM KVETPPRKVS KSGRAKTLRF GLMPFPPPEK EEDEASDNFS QTISQKYDPA 300 DSHAFHSLEA WDDMSWNEQF VYGDDQNKML SSLVSDTFPV MHSSTLHSFP DFHQHPLDMD 360 FNGVILDQVA PVGDANNEWF PDLEKDGSDH

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence Send to blast

MLTCRKNVHV LLVEHETKDR DTIMNMLNYF SYEATSVKLA STALSILSKG KVNFNFIVAN  60
INSPDLLAFQ LLHEATKMNL GVIFMLDVDD EATTRMAVEQ GALLCVTKSM IMGILGCLWQ  120
FMLHKRASKT PQALQEKELR KCVVESNPNT NISNSEQNYK SMEKYSENEG GRLKKSGGGG  180
RLKRKDWTEW TVELHAKFMA AAKQLGQGKC YPKDVLELMN VPGLTRMQVA SHLQKCRNAS  240
WLPPNERKQM KVETPPRKVS KSGRAKTLRF GLMPFPPPEK EEDEASDNFS QTISQKYDPA  300
DSHAFHSLEA WDDMSWNEQF VYGDDQNKML SSLVSDTFPV MHSSTLHSFP DFHQHPLDMD  360
FNGVILDQVA PVGDANNEWF PDLEKDGSDH

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA813	23	84