PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Ote100129680141 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 228aa MW: 25598 Da PI: 8.0439 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 17.9 | 5.7e-06 | 175 | 215 | 9 | 55 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 E++R +r+++ Lr ++P a k++s +++L +Av+Y+ksL+ Ote100129680141|100129680141 175 EKKR-RRMRKMVKALRGIVPGA-----KRMSSVAVLDEAVRYLKSLR 215 5555.5899999*********9.....89***************995 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 10.594 | 165 | 214 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 3.63E-6 | 174 | 219 | No hit | No description |
SMART | SM00353 | 0.0015 | 174 | 220 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 4.0E-6 | 175 | 221 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 3.14E-8 | 175 | 221 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 228 aa Download sequence Send to blast |
MHSNQPNFSG KPMIPVGNQV GYMQNARIAS LFDGLVAPHI PPLSNVDIQT SDACPRNFII 60 FDQTSNRSQI MLHPEISSKM FYPGFGGEMP TLQDKLIQKE ATDEREVASQ LKEDSDDIDA 120 LLSTAYEEED EGSDDEVSTA RTNAIYECSS PDSCSNYEPV SKKRRSLFRK SYGSEKKRRR 180 MRKMVKALRG IVPGAKRMSS VAVLDEAVRY LKSLRVEVKK LGVGNWKE |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_011085262.1 | 1e-103 | transcription factor bHLH144 | ||||
Refseq | XP_011085263.1 | 1e-103 | transcription factor bHLH144 | ||||
Refseq | XP_011085264.1 | 1e-103 | transcription factor bHLH144 | ||||
TrEMBL | A0A4D8XRB4 | 1e-106 | A0A4D8XRB4_SALSN; Uncharacterized protein | ||||
STRING | Migut.H01376.1.p | 2e-83 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA8124 | 19 | 24 |