PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Ote100129520021 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 167aa MW: 19151.4 Da PI: 11.4768 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 28.1 | 4.4e-09 | 119 | 142 | 5 | 28 |
CHHHCHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaei 28 +r +r++kNRe+A rsR+RK+++i Ote100129520021|100129520021 119 RRHKRMIKNRESAARSRARKQESI 142 799******************987 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57959 | 7.09E-6 | 119 | 142 | No hit | No description |
Pfam | PF00170 | 8.2E-8 | 119 | 142 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.3E-5 | 119 | 142 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 122 | 137 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 167 aa Download sequence Send to blast |
MWASSXXXXX XXXXXXXXXX XXXXXXXPYT ASGLRLPKTR EEVWNDISDL HHHFSSRGMI 60 FQDFFSKDPP PTAVPSPPPT MLALNSAPLL FQQNHQTRPM LHVPAAAFDA GGRKNGSERR 120 HKRMIKNRES AARSRARKQE SILFSRFSHL VFDSRKLIIV VRAGLYE |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_011099889.1 | 2e-22 | protein FD | ||||
TrEMBL | A0A1S3YWP4 | 1e-16 | A0A1S3YWP4_TOBAC; FD4 | ||||
STRING | XP_009802867.1 | 2e-17 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3572 | 22 | 39 |