PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100129170001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | ZF-HD | ||||||||
Protein Properties | Length: 101aa MW: 10712.3 Da PI: 8.3554 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 74.2 | 1.9e-23 | 61 | 101 | 4 | 46 |
ZF-HD_dimer 4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaAC 46 v YkeCl+NhAaslGghavDGCgEfmps+ +++++lkCaAC Ote100129170001|100129170001 61 VAYKECLRNHAASLGGHAVDGCGEFMPSP--ATDPTSLKCAAC 101 79*************************94..457********* PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04770 | 2.0E-19 | 61 | 101 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
ProDom | PD125774 | 1.0E-13 | 61 | 101 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
PROSITE profile | PS51523 | 22.182 | 63 | 101 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
TIGRFAMs | TIGR01566 | 1.5E-20 | 63 | 101 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 101 aa Download sequence Send to blast |
MXXXXXXXXX XXXLSNSAVK STDAEPESPT RIRPVKLPPP PPSGNGVLKR HAPPHLHPVL 60 VAYKECLRNH AASLGGHAVD GCGEFMPSPA TDPTSLKCAA C |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011085755.1 | 4e-33 | zinc-finger homeodomain protein 9 | ||||
Swissprot | Q9LHF0 | 4e-18 | ZHD9_ARATH; Zinc-finger homeodomain protein 9 | ||||
TrEMBL | A0A2G9HG83 | 1e-32 | A0A2G9HG83_9LAMI; Uncharacterized protein | ||||
STRING | XP_009797863.1 | 3e-28 | (Nicotiana sylvestris) | ||||
STRING | PGSC0003DMT400034368 | 2e-28 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1088 | 24 | 85 |
Publications ? help Back to Top | |||
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