PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100128810001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | ERF | ||||||||
Protein Properties | Length: 149aa MW: 17046.6 Da PI: 10.8166 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.3 | 3.7e-18 | 61 | 110 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ykGVr + +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++ a+++++g Ote100128810001|100128810001 61 IYKGVRMRV-WGKWVSEIREPRK---KSRIWLGTFATPEMAARAHDVAALAIKG 110 69****999.**********843...6***********************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 4.65E-25 | 60 | 114 | No hit | No description |
Pfam | PF00847 | 1.1E-12 | 60 | 110 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.6E-28 | 61 | 124 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.9E-27 | 61 | 114 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 20.653 | 61 | 139 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.09E-18 | 61 | 113 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 1.0E-9 | 62 | 73 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.0E-9 | 84 | 100 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence Send to blast |
MAEPPYSETE SSSLSSRENQ HKKRSRDSCC ESDEKRAKKR XXXXXXXXXX XXXXXXGKHP 60 IYKGVRMRVW GKWVSEIREP RKKSRIWLGT FATPEMAARA HDVAALAIKG KTAAXXXXXX 120 XXXXXXXXXX XXXXXXXXPP PPPSHVLPT |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 3e-13 | 58 | 113 | 11 | 67 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011093630.1 | 6e-32 | ethylene-responsive transcription factor TINY-like | ||||
TrEMBL | A0A2G9GV67 | 1e-31 | A0A2G9GV67_9LAMI; Uncharacterized protein | ||||
STRING | Migut.J01109.1.p | 8e-30 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA212 | 24 | 225 |