PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100126670031 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | B3 | ||||||||
Protein Properties | Length: 192aa MW: 22076.2 Da PI: 9.8477 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 65.1 | 1e-20 | 16 | 105 | 1 | 97 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvv 81 ffkv +++ l+s++l +p +f++e++ s +++l++ +g+ W v + +k++++++l++GWk Fv+ + k+g+f+ Ote100126670031|100126670031 16 FFKVV-TPSILTSHQLLIPPDFIKEFKRT--ISEKVILTNADGKAWYVDV--NKTRDGVFLKNGWKTFVDYHCFKVGEFLF 91 78887.667777778**********9744..8889***************..***************************** PP EEE-SSSEE..EEEEE CS B3 82 Fkldgrsefelvvkvf 97 F+++g+ +f vk++ Ote100126670031|100126670031 92 FRYEGHYSF--SVKIY 105 ****99888..77766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50863 | 14.621 | 15 | 108 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 2.2E-23 | 15 | 110 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 2.93E-17 | 16 | 105 | No hit | No description |
SuperFamily | SSF101936 | 6.67E-23 | 16 | 110 | IPR015300 | DNA-binding pseudobarrel domain |
Pfam | PF02362 | 4.3E-18 | 16 | 105 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 1.7E-13 | 16 | 108 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence Send to blast |
MAKPRRGRPT RIGAEFFKVV TPSILTSHQL LIPPDFIKEF KRTISEKVIL TNADGKAWYV 60 DVNKTRDGVF LKNGWKTFVD YHCFKVGEFL FFRYEGHYSF SVKIYGTNGC IKDTFQSKNI 120 ISHANFEEET DEETKPKQTS LKRPLKRTKH SESSGEVNEA RKEVGLYENS PCFTSHSRGP 180 KNHILVEVVS PL |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011086144.1 | 3e-39 | putative B3 domain-containing protein At5g66980 | ||||
TrEMBL | A0A2G9HI80 | 9e-51 | A0A2G9HI80_9LAMI; Uncharacterized protein | ||||
STRING | Migut.B01169.1.p | 2e-32 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3779 | 22 | 44 |