PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Ote100122340001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 124aa MW: 13552.1 Da PI: 10.6945 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 21.6 | 3.9e-07 | 97 | 121 | 5 | 29 |
HHHHHHHHHHHHHHHHHHHHCTSCC CS HLH 5 hnerErrRRdriNsafeeLrellPk 29 h+++Er RR+ri +++ L++l+P+ Ote100122340001|100122340001 97 HSIAERLRRERIAERIRALQDLVPS 121 99**********************8 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 4.06E-7 | 90 | 123 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 11.274 | 92 | 124 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 8.1E-7 | 96 | 122 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.7E-4 | 97 | 121 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 124 aa Download sequence Send to blast |
MANNPGEASS DDFFEQILGY PSYAVGSDAK QGKGGFNDAS GSGKRFQRDD VLDSRAISVK 60 GGFHGQPMAN NIQQTAPHPP AIRPRVRARR GQATDPHSIA ERLRRERIAE RIRALQDLVP 120 SVNK |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_012831677.1 | 7e-58 | PREDICTED: transcription factor UNE12 | ||||
Swissprot | Q93Y00 | 1e-25 | BH007_ARATH; Transcription factor bHLH7 | ||||
TrEMBL | A0A022S2E7 | 2e-56 | A0A022S2E7_ERYGU; Uncharacterized protein | ||||
STRING | Migut.D00370.1.p | 3e-57 | (Erythranthe guttata) |