PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100121130071 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | HB-other | ||||||||
Protein Properties | Length: 129aa MW: 15508.7 Da PI: 9.7973 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 43.3 | 6.3e-14 | 3 | 53 | 6 | 56 |
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +f++ q+++Le +F++ ++++e+++ LA+++gL+ +qV+ WF rR +e+ Ote100121130071|100121130071 3 RFQQFQIDALEVAFQERGHLTRERKAALADQTGLDVEQVTSWFNRRRKRER 53 699*********************************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00389 | 4.3E-7 | 1 | 59 | IPR001356 | Homeobox domain |
PROSITE profile | PS50071 | 13.896 | 1 | 55 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 6.84E-12 | 3 | 61 | IPR009057 | Homeodomain-like |
CDD | cd00086 | 3.19E-9 | 3 | 53 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 3.6E-13 | 3 | 53 | IPR009057 | Homeodomain-like |
Pfam | PF00046 | 3.0E-11 | 3 | 53 | IPR001356 | Homeobox domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 129 aa Download sequence Send to blast |
MNRFQQFQID ALEVAFQERG HLTRERKAAL ADQTGLDVEQ VTSWFNRRRK RERDGERRLM 60 SERRKSELEQ ALXXXXXXXX XXXXXXXXXX XXXXXLNDEI QKLRQQLRSF VGYDSDISDP 120 IRRFVNGYE |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA15650 | 4 | 7 |