PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100120830011
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family MYB_related
Protein Properties Length: 245aa    MW: 26525.2 Da    PI: 10.2677
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100120830011genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.29.1e-1489133347
                                   SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
               Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                                   +WT+eE++l++ + ++ G+g W++I+r   k+Rt+ q+ s+ qky
  Ote100120830011|100120830011  89 PWTEEEHKLFLIGLQKVGKGGWRRISRNYVKTRTPTQVASHAQKY 133
                                   8*******************************************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129418.04682138IPR017930Myb domain
SuperFamilySSF466897.48E-1784139IPR009057Homeodomain-like
TIGRFAMsTIGR015576.1E-1685136IPR006447Myb domain, plants
SMARTSM007171.6E-886136IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.6E-1088133IPR009057Homeodomain-like
CDDcd001671.77E-889134No hitNo description
PfamPF002495.8E-1189133IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MPLYAESPAV GLGGSEIMLF GVRVNVDPMR KSVSMNNLSE YDPVSNTGNL SEKKAAPAKE  60
GAVPPGYASA DDAAPPPSSG GAERKRGTPW TEEEHKLFLI GLQKVGKGGW RRISRNYVKT  120
RTPTQVASHA QKYFLRRSNL NRRRRASVFD ITTDSVAAMA MEEARKCREI SPMQGENPLK  180
NGQDFLVDRS SVLIVNRAPV VSMPPSSAMA DLKLNQQVPP EPSALSLRLS LSSSFINGDG  240
TITVA
Functional Description ? help Back to Top
Source Description
UniProtBinds selectively to the DNA sequence 5'-[GA]GATAA-3' and may act as a transcription factor involved in the regulation of drought-responsive genes. Enhances stomatal closure in response to abscisic acid (ABA). Confers drought and salt tolerance. {ECO:0000269|PubMed:21030505}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by drought, high salinity, and ABA. {ECO:0000269|PubMed:21030505}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012853030.12e-78PREDICTED: transcription factor MYB1R1-like
SwissprotQ2V9B08e-57MY1R1_SOLTU; Transcription factor MYB1R1
TrEMBLA0A4D8YFX13e-92A0A4D8YFX1_SALSN; Uncharacterized protein
STRINGMigut.D01891.1.p6e-78(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA25742351
Publications ? help Back to Top
  1. Shin D, et al.
    Expression of StMYB1R-1, a novel potato single MYB-like domain transcription factor, increases drought tolerance.
    Plant Physiol., 2011. 155(1): p. 421-32
    [PMID:21030505]