PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100120600101
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 260aa    MW: 28791.1 Da    PI: 5.8067
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100120600101genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.61.4e-101812211055
                                   HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                   r+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  Ote100120600101|100120600101 181 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 221
                                   9******************97.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.224171220IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-14171237IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-12176231IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.3E-11177226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.11E-12180225No hitNo description
PfamPF000107.0E-8181221IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    Send to blast
MEGAETICVG EWNSSFNSDE ADFMAKLFGN CSLPNAAAFW GGDESNSGIE TATMFSFSLG  60
SNSSNLMAMD FCTMDGSNNV MDGDDVSNDE PPHSLQEDKM SSRKRPRVLG ESQRSKKLKK  120
RVQVIHDSNN VVLHRQSSSG CLSEDDSSVL NSSSSSKRNE GQKSKRASRG SATDPQSLYA  180
RKRRERINER LRILQNLVPN GTKVDISTML EEAVQYVKFL QLQIKLLSSD DMWMYAPIAY  240
NGMGIGLDFN IPSPKPQSYT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012836777.17e-76PREDICTED: transcription factor bHLH54-like
SwissprotQ7XHI94e-53BH084_ARATH; Transcription factor bHLH84
TrEMBLA0A4D8ZSH84e-97A0A4D8ZSH8_SALSN; Uncharacterized protein
STRINGMigut.B00443.1.p5e-72(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA63922101