PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100120600101 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 260aa MW: 28791.1 Da PI: 5.8067 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32.6 | 1.4e-10 | 181 | 221 | 10 | 55 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+RR+riN+++ L+ l+P+ +K++ +++Le+Av+Y+k Lq Ote100120600101|100120600101 181 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 221 9******************97.....8******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 15.224 | 171 | 220 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.44E-14 | 171 | 237 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.1E-12 | 176 | 231 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 4.3E-11 | 177 | 226 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 7.11E-12 | 180 | 225 | No hit | No description |
Pfam | PF00010 | 7.0E-8 | 181 | 221 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence Send to blast |
MEGAETICVG EWNSSFNSDE ADFMAKLFGN CSLPNAAAFW GGDESNSGIE TATMFSFSLG 60 SNSSNLMAMD FCTMDGSNNV MDGDDVSNDE PPHSLQEDKM SSRKRPRVLG ESQRSKKLKK 120 RVQVIHDSNN VVLHRQSSSG CLSEDDSSVL NSSSSSKRNE GQKSKRASRG SATDPQSLYA 180 RKRRERINER LRILQNLVPN GTKVDISTML EEAVQYVKFL QLQIKLLSSD DMWMYAPIAY 240 NGMGIGLDFN IPSPKPQSYT |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012836777.1 | 7e-76 | PREDICTED: transcription factor bHLH54-like | ||||
Swissprot | Q7XHI9 | 4e-53 | BH084_ARATH; Transcription factor bHLH84 | ||||
TrEMBL | A0A4D8ZSH8 | 4e-97 | A0A4D8ZSH8_SALSN; Uncharacterized protein | ||||
STRING | Migut.B00443.1.p | 5e-72 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA639 | 22 | 101 |