PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100120410061 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 378aa MW: 41290.1 Da PI: 6.1829 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.6 | 7.3e-11 | 226 | 274 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR+ri +++ L+el+P + +k Ka++L + ++Y++sLq Ote100120410061|100120410061 226 NSHSLAERVRRERISERMRLLQELVPGC----NKITGKAMMLDEIINYVQSLQ 274 58**************************....999*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 5.89E-17 | 221 | 290 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.30E-11 | 221 | 278 | No hit | No description |
PROSITE profile | PS50888 | 15.447 | 223 | 273 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.3E-16 | 223 | 291 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 4.9E-8 | 226 | 274 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 6.5E-10 | 229 | 279 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009637 | Biological Process | response to blue light | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 378 aa Download sequence Send to blast |
MGSEESADRV FQQRGGGSSN LNSGMVGTNS VSDKVSGVTM CSESMFYGSN WDPIMSLSQT 60 GNFGNSNMVS QSEFANPLML ENQTMGSSLV QFPSDTGLAD LVPRIPTFGG GSFSEMVTPF 120 GHNADSNNHC PNSDNRMLGA SPYGKRKREV PQGVPSPKNA EEEQQKDPSG DTSEFPKEDD 180 EKKQKFEKNI GRGKQVAKQA KENSSGAEPS KDNYIHVRAK RGQATNSHSL AERVRRERIS 240 ERMRLLQELV PGCNKITGKA MMLDEIINYV QSLQQQVEFL SMKLATVNPE LNIDIDRILS 300 KDILHLRGNN ASPLGGLSSS LPFPGYPQGT FNNAPGSNVF HSLPQHVWNN EIQGLLQMGF 360 DPNPSVSMGQ NGLSKMEL |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00135 | DAP | Transfer from AT1G10120 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011069808.1 | 1e-176 | transcription factor bHLH74 | ||||
TrEMBL | A0A0H3Y7H6 | 0.0 | A0A0H3Y7H6_SALMI; Basic helix-loop-helix transcription factor | ||||
STRING | EOY15650 | 1e-129 | (Theobroma cacao) | ||||
STRING | XP_004290997.1 | 1e-129 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5250 | 24 | 35 |