PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100120410021 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 409aa MW: 44837.2 Da PI: 6.1861 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.4 | 8.1e-11 | 226 | 274 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR+ri +++ L+el+P + +k Ka++L + ++Y++sLq Ote100120410021|100120410021 226 NSHSLAERVRRERISERMRLLQELVPGC----NKITGKAMMLDEIINYVQSLQ 274 58**************************....999*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 6.67E-17 | 221 | 290 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.57E-11 | 221 | 278 | No hit | No description |
PROSITE profile | PS50888 | 15.447 | 223 | 273 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.5E-16 | 223 | 291 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 5.5E-8 | 226 | 274 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 6.5E-10 | 229 | 279 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 409 aa Download sequence Send to blast |
MGSEESADRV FQQRGGGSSN LNSGMVGTNS VSDKVSGVTM CSESMFYGSN WDPIMSLSQT 60 GNFGNSNMVS QSEFANPLML ENQTMGSSLV QFPSDTGLAD LVPRIPTFGG GSFSEMVTPF 120 GHNADSNNHC PNSDNRMLGA SPYGKRKREV PQGVPSPKNA EEEQQKDPSG DTSEFPKEDD 180 EKKQKFEKNI GRGKQVAKQA KENSSGAEPS KDNYIHVRAK RGQATNSHSL AERVRRERIS 240 ERMRLLQELV PGCNKITGKA MMLDEIINYV QSLQQQVEFL SMKLATVNPE LNIDIDRILS 300 KDILHLRGNN ASPLGGLSSS LPFPGYPQGT FNNAPGSNVF HSLPQHVWNN EIQGLLQMGF 360 DPNPSVSMGQ NGNFRDRVSQ LITSVLLSQF IIMIVFCRAV EDGAIERLL |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011069808.1 | 1e-172 | transcription factor bHLH74 | ||||
TrEMBL | A0A0H3Y7H6 | 0.0 | A0A0H3Y7H6_SALMI; Basic helix-loop-helix transcription factor | ||||
STRING | XP_004290997.1 | 1e-129 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5250 | 24 | 35 |