PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100120410021
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 409aa    MW: 44837.2 Da    PI: 6.1861
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100120410021genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.48.1e-11226274355
                                   HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                    +h+ +Er RR+ri +++  L+el+P +    +k   Ka++L + ++Y++sLq
  Ote100120410021|100120410021 226 NSHSLAERVRRERISERMRLLQELVPGC----NKITGKAMMLDEIINYVQSLQ 274
                                   58**************************....999*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.67E-17221290IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.57E-11221278No hitNo description
PROSITE profilePS5088815.447223273IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-16223291IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.5E-8226274IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.5E-10229279IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 409 aa     Download sequence    Send to blast
MGSEESADRV FQQRGGGSSN LNSGMVGTNS VSDKVSGVTM CSESMFYGSN WDPIMSLSQT  60
GNFGNSNMVS QSEFANPLML ENQTMGSSLV QFPSDTGLAD LVPRIPTFGG GSFSEMVTPF  120
GHNADSNNHC PNSDNRMLGA SPYGKRKREV PQGVPSPKNA EEEQQKDPSG DTSEFPKEDD  180
EKKQKFEKNI GRGKQVAKQA KENSSGAEPS KDNYIHVRAK RGQATNSHSL AERVRRERIS  240
ERMRLLQELV PGCNKITGKA MMLDEIINYV QSLQQQVEFL SMKLATVNPE LNIDIDRILS  300
KDILHLRGNN ASPLGGLSSS LPFPGYPQGT FNNAPGSNVF HSLPQHVWNN EIQGLLQMGF  360
DPNPSVSMGQ NGNFRDRVSQ LITSVLLSQF IIMIVFCRAV EDGAIERLL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011069808.11e-172transcription factor bHLH74
TrEMBLA0A0H3Y7H60.0A0A0H3Y7H6_SALMI; Basic helix-loop-helix transcription factor
STRINGXP_004290997.11e-129(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA52502435