PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100120300041

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

EIL

Protein Properties

Length: 455aa MW: 51623.5 Da PI: 4.817

Description

EIL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100120300041	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	EIN3	262.9	1.5e-80	37	195	1	164
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekg 81 +el+krmw+d+ml krlke+k+ + dk+ +++k+++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekg Ote100120300041\|100120300041 37 DELEKRMWRDRMLYKRLKEQKRGK--DKND--DSAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKG 113 79******************83..4554..88999**************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS- CS EIN3 82 kpvegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrf 162 kpv+gasd+LraWWkekv+fdrngpaaisky+ ++ i+++++ +++ s +++l+elqDTtlgSLLsalmqhc+ppqrrf Ote100120300041\|100120300041 114 KPVTGASDNLRAWWKEKVRFDRNGPAAISKYETEHSIPGKSQVSSA-VASMPQTLQELQDTTLGSLLSALMQHCNPPQRRF 193 ***********************************8888866.9999**************************** PP -T CS EIN3 163 pl 164 p Ote100120300041\|100120300041 194 PR 195 95 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04873	1.4E-77	37	194	No hit	No description
Gene3D	G3DSA:1.10.3180.10	1.7E-13	159	195	IPR023278	Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamily	SSF116768	1.28E-10	165	195	IPR023278	Ethylene insensitive 3-like protein, DNA-binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence Send to blast
MGIFEEMGFC DNLDFISGPT GETKVDDDYS DEEMDVDELE KRMWRDRMLY KRLKEQKRGK 60 DKNDDSAKQR QSQEQARRKK MSRAQDGILK YMLKMMEVCK AQGFVYGIIP EKGKPVTGAS 120 DNLRAWWKEK VRFDRNGPAA ISKYETEHSI PGKSQVSSAV ASMPQTLQEL QDTTLGSLLS 180 ALMQHCNPPQ RRFPRSYLVS DNSDYDVEGV DDAVDCKPFD RSPFNFEVSV TQSRHTVPPL 240 APVKGEIFDV DVDFTSKRKH MPVEERTGER IYTCEFPQCP HSDKLMGFSD QAWRNNHQNN 300 CQFRFGSSND VVLNNASSSV NVSELGIPED GQKMITELMT MYDNNHHVGS GFDPDHFNIL 360 MDRNPQQSAI QLEQGGNSIG QGGLSQVGAY QEASVPLSNS TLQATEFQYD QCRSLYNGDM 420 GENFADFRLD SPFNFPAGDF SVDPLPKHEV PLWYI

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence Send to blast

MGIFEEMGFC DNLDFISGPT GETKVDDDYS DEEMDVDELE KRMWRDRMLY KRLKEQKRGK  60
DKNDDSAKQR QSQEQARRKK MSRAQDGILK YMLKMMEVCK AQGFVYGIIP EKGKPVTGAS  120
DNLRAWWKEK VRFDRNGPAA ISKYETEHSI PGKSQVSSAV ASMPQTLQEL QDTTLGSLLS  180
ALMQHCNPPQ RRFPRSYLVS DNSDYDVEGV DDAVDCKPFD RSPFNFEVSV TQSRHTVPPL  240
APVKGEIFDV DVDFTSKRKH MPVEERTGER IYTCEFPQCP HSDKLMGFSD QAWRNNHQNN  300
CQFRFGSSND VVLNNASSSV NVSELGIPED GQKMITELMT MYDNNHHVGS GFDPDHFNIL  360
MDRNPQQSAI QLEQGGNSIG QGGLSQVGAY QEASVPLSNS TLQATEFQYD QCRSLYNGDM  420
GENFADFRLD SPFNFPAGDF SVDPLPKHEV PLWYI

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008357657.2	1e-108	ETHYLENE INSENSITIVE 3-like 1 protein isoform X1
Refseq	XP_028962117.1	1e-108	ETHYLENE INSENSITIVE 3-like 1 protein isoform X1
STRING	XP_008357657.1	1e-107	(Malus domestica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA304	23	178