PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100118870131

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

bHLH

Protein Properties

Length: 246aa MW: 27713.1 Da PI: 6.8687

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100118870131	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.7	9.7e-09	129	176	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN+++ L++++P + k + a +L + ++Y++sLq Ote100118870131\|100118870131 129 SHSLAERVRREKINERLRCLQDIVPGC----YKTMGMAVMLDEIINYVQSLQ 176 8***********************9....35599999********998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	1.19E-16	123	193	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	3.37E-10	123	180	No hit	No description
Gene3D	G3DSA:4.10.280.10	2.2E-16	125	186	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	15.605	125	175	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	7.8E-6	129	176	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	5.8E-9	131	181	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence Send to blast
MAADQQIFSD NYKQSFSLAD IDPNIDLTNH FSSINPIYQH PSAFILDDQY LPELSDNCTL 60 LQHNDIHHLQ RKRRAVEISS SSANSSPQVS DNTKSSVGRG KKVKIYEKKE EKSADVVHVR 120 AKRGQATDSH SLAERVRREK INERLRCLQD IVPGCYKTMG MAVMLDEIIN YVQSLQNQVE 180 FLSMKLTAAS TFYDFNSEAD ALETMQRAKA FEASKIQNGV SSGLPSAQLA QLGCNFEYCP 240 QFPQNK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011080441.1	4e-93	transcription factor BEE 1-like
TrEMBL	A0A2G9G9V7	1e-91	A0A2G9G9V7_9LAMI; Uncharacterized protein
STRING	Migut.N02357.1.p	4e-80	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3971	23	44