PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Ote100118480091 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 154aa MW: 18054 Da PI: 6.9614 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 45.6 | 1.5e-14 | 42 | 91 | 5 | 54 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 +++rr+++NRe+ArrsR RK+ ++eL v L +eN+ L+++l++ ++ Ote100118480091|100118480091 42 RKQRRMISNRESARRSRMRKQRHLDELWSQVLRLRTENHNLIDKLNHVSE 91 79******************************************999876 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.0E-16 | 38 | 102 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.99 | 40 | 103 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 9.1E-13 | 42 | 115 | No hit | No description |
SuperFamily | SSF57959 | 4.88E-13 | 42 | 92 | No hit | No description |
Pfam | PF00170 | 3.0E-12 | 42 | 91 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 1.07E-17 | 43 | 94 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 45 | 60 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 154 aa Download sequence Send to blast |
MFLPNYNTSP LQSATQEFSP NSTCNSTSDE AEDHQLRVID ERKQRRMISN RESARRSRMR 60 KQRHLDELWS QVLRLRTENH NLIDKLNHVS ESHDRVVQEN AKLKEEASDL RQMLTDIHIS 120 NSYTIFRDLD DISCNTAHLR AESSNQPVTT NLLH |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_011077776.1 | 7e-82 | basic leucine zipper 43 | ||||
Swissprot | Q9FMC2 | 3e-39 | BZP43_ARATH; Basic leucine zipper 43 | ||||
TrEMBL | A0A2G9I825 | 2e-77 | A0A2G9I825_9LAMI; Uncharacterized protein | ||||
STRING | cassava4.1_022183m | 2e-68 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA947 | 24 | 92 |
Publications ? help Back to Top | |||
---|---|---|---|
|